RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 EEPD1Q7L9B9 569 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 MCF2L2Q86YR7 1114 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 C7orf61Q8IZ16 206 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 KLHDC9Q8NEP7 349 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 DNERQ8NFT8 737 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 KCNB2Q92953 911 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 PIGSQ96S52 555 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 PHF24Q9UPV7 400 aa11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 MRPL11Q9Y3B7 192 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-220ENST00000581835 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 OPLAHO14841 1288 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 EDNRBP24530 442 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 KIF5BP33176 963 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 GJA9P57773 515 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 IRX5P78411 483 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 TNFAIP2Q03169 654 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 CCSAPQ6IQ19 270 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 SLC39A5Q6ZMH5 540 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 DHX32Q7L7V1 743 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 SGMS1Q86VZ5 419 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 HOMER1Q86YM7 354 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 FBXO16Q8IX29 292 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 FERMT2Q96AC1 680 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 TSEN34Q9BSV6 310 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 VTA1Q9NP79 307 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 PDGFCQ9NRA1 345 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 PCDHA1Q9Y5I3 950 aa11.92□□□□□ -0.5
PPP4R1-220ENST00000581835 PNMA6FA0A0J9YX94 578 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 MYADML2A6NDP7 307 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 REC8O95072 547 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 CFBP00751 764 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 CALM1P0DP23 149 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 CALM2P0DP24 149 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 CALM3P0DP25 149 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 RXRAP19793 462 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 CST5P28325 142 aaPredicted RBP11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 NKX3-2P78367 333 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 GHRHRQ02643 423 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 SNX17Q15036 470 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 KCNA10Q16322 511 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 IQSEC1Q6DN90 963 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 SYTL5Q8TDW5 730 aaPredicted RBP11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 TAAR1Q96RJ0 339 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 SPZ1Q9BXG8 430 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 COL20A1Q9P218 1284 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 GNEQ9Y223 722 aaKnown RBP11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
PPP4R1-220ENST00000581835 A0A1W2PQ45 241 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 A0A1W2PQY0 241 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 RBM47A0AV96 593 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 MOXD2PA6NHM9 499 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 B4DLN1 442 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 CTAGE5O15320 804 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 PLEKHA8P1O95397 391 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 HMGB1P09429 215 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 C6orf222P0C671 652 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 SMPD1P17405 629 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 GNAQP50148 359 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 HSD17B4P51659 736 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 MRPL12P52815 198 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 ACLYP53396 1101 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 TRAF1Q13077 416 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 TMEM63BQ5T3F8 832 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 C1orf53Q5VUE5 145 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 APOA5Q6Q788 366 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 FANCBQ8NB91 859 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 PIBF1Q8WXW3 757 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 MPHOSPH6Q99547 160 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 LZTS2Q9BRK4 669 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 SPC25Q9HBM1 224 aa11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 MAP3K20Q9NYL2 800 aaKnown RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 ZMYND8Q9ULU4 1186 aaPredicted RBP11.9□□□□□ -0.5
PPP4R1-220ENST00000581835 LAMA3Q16787 3333 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 CPA1P15085 419 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 SYN1P17600 705 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 PTGS1P23219 599 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 RTP1P59025 263 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 PDE4DQ08499 809 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 DUSP28Q4G0W2 176 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 GNASQ5JWF2 1037 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 NOL8Q76FK4 1167 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 TLK2Q86UE8 772 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 MICU3Q86XE3 530 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 CMTR1Q8N1G2 835 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 SAMD3Q8N6K7 520 aa11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 PCSK9Q8NBP7 692 aaKnown RBP11.89□□□□□ -0.51
PPP4R1-220ENST00000581835 NSUN6Q8TEA1 469 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms