RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 MKNK2Q9HBH9 465 aa5.22□□□□□ -1.57
DDX42-211ENST00000580108 NMRK2Q9NPI5 230 aa5.22□□□□□ -1.57
DDX42-211ENST00000580108 CACNA2D2Q9NY47 1150 aa5.22□□□□□ -1.57
DDX42-211ENST00000580108 TSPYL4Q9UJ04 414 aa5.22□□□□□ -1.57
DDX42-211ENST00000580108 VAV3Q9UKW4 847 aa5.22□□□□□ -1.57
DDX42-211ENST00000580108 PCOLCE2Q9UKZ9 415 aa5.22□□□□□ -1.57
DDX42-211ENST00000580108 LAS1LQ9Y4W2 734 aaKnown RBP5.22□□□□□ -1.57
DDX42-211ENST00000580108 DICER1Q9UPY3 1922 aaKnown RBP5.22□□□□□ -1.57
DDX42-211ENST00000580108 UTRNP46939 3433 aa5.22□□□□□ -1.57
DDX42-211ENST00000580108 COL4A1P02462 1669 aa5.21□□□□□ -1.57
DDX42-211ENST00000580108 A0A087WZG4 1122 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 HTATSF1O43719 755 aaKnown RBP5.21□□□□□ -1.58
DDX42-211ENST00000580108 EIF2S2P20042 333 aaKnown RBP5.21□□□□□ -1.58
DDX42-211ENST00000580108 HMGB2P26583 209 aaKnown RBP5.21□□□□□ -1.58
DDX42-211ENST00000580108 NTF4P34130 210 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 PPP2R3AQ06190 1150 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 ZNF252P-AS1Q0IIN9 211 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 AOC3Q16853 763 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 ATG4DQ86TL0 474 aaPredicted RBP5.21□□□□□ -1.58
DDX42-211ENST00000580108 C3orf58Q8NDZ4 430 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 GPBAR1Q8TDU6 330 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 ZNF622Q969S3 477 aaKnown RBP eCLIP5.21□□□□□ -1.588e-8■■□□□ 12.8
DDX42-211ENST00000580108 RNF181Q9P0P0 153 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 UBN2Q6ZU65 1347 aa5.21□□□□□ -1.58
DDX42-211ENST00000580108 SOWAHDA6NJG2 315 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 BIN1O00499 593 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 APAF1O14727 1248 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 ITIH2P19823 946 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 ARNTP27540 789 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 ERVK-24P63145 666 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 DSC3Q14574 896 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 ZNF124Q15973 351 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 RASIP1Q5U651 963 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 MAP1SQ66K74 1059 aaPredicted RBP5.2□□□□□ -1.58
DDX42-211ENST00000580108 NXPE4Q6UWF7 544 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 NBPF5PQ86XG9 351 aaPredicted RBP5.2□□□□□ -1.58
DDX42-211ENST00000580108 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.2□□□□□ -1.58
DDX42-211ENST00000580108 SYNE4Q8N205 404 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 CNBD1Q8NA66 436 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 RNF214Q8ND24 703 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 FAM168AQ92567 244 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 HRASLS5Q96KN8 279 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 SETDB2Q96T68 719 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 TEX13AQ9BXU3 409 aaPredicted RBP5.2□□□□□ -1.58
DDX42-211ENST00000580108 TNKS2Q9H2K2 1166 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 NIP7Q9Y221 180 aaKnown RBP eCLIP5.2□□□□□ -1.58
DDX42-211ENST00000580108 COL4A5P29400 1685 aa5.2□□□□□ -1.58
DDX42-211ENST00000580108 DDX60Q8IY21 1712 aaKnown RBP5.2□□□□□ -1.58
DDX42-211ENST00000580108 H0YIN7 160 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 TCERG1O14776 1098 aaKnown RBP5.19□□□□□ -1.58
DDX42-211ENST00000580108 NPHP1O15259 732 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 XRCC5P13010 732 aaKnown RBP5.19□□□□□ -1.58
DDX42-211ENST00000580108 NME2P22392 152 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 HTRA3P83110 453 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 AIMP1Q12904 312 aaKnown RBP5.19□□□□□ -1.58
DDX42-211ENST00000580108 WDR43Q15061 677 aaKnown RBP eCLIP5.19□□□□□ -1.58
DDX42-211ENST00000580108 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.19□□□□□ -1.58
DDX42-211ENST00000580108 PPM1JQ5JR12 505 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 SUSD4Q5VX71 490 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 LRP10Q7Z4F1 713 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 TTLL6Q8N841 843 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 PI4K2BQ8TCG2 481 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 GRIN3AQ8TCU5 1115 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 RUNDC1Q96C34 613 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 PRDM7Q9NQW5 492 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 AKAP2Q9Y2D5 859 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 CSADQ9Y600 493 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 MAP3K15Q6ZN16 1313 aa5.19□□□□□ -1.58
DDX42-211ENST00000580108 SPEF2Q9C093 1822 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 WDR90Q96KV7 1748 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 TMEM265A0A087WTH1 108 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 PNMA6FA0A0J9YX94 578 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 ELL2O00472 640 aaPredicted RBP5.18□□□□□ -1.58
DDX42-211ENST00000580108 PAGE1O75459 146 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 SRGNP10124 158 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 BMP6P22004 513 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 RING1Q06587 406 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 ENOX2Q16206 610 aaKnown RBP5.18□□□□□ -1.58
DDX42-211ENST00000580108 NPM2Q86SE8 214 aaKnown RBP5.18□□□□□ -1.58
DDX42-211ENST00000580108 SPACA3Q8IXA5 215 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 XAGE3Q8WTP9 111 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 NECAB3Q96P71 396 aaPredicted RBP5.18□□□□□ -1.58
DDX42-211ENST00000580108 BRIP1Q9BX63 1249 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 SSU72Q9NP77 194 aaKnown RBP5.18□□□□□ -1.58
DDX42-211ENST00000580108 CHPF2Q9P2E5 772 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 CEP350Q5VT06 3117 aa5.18□□□□□ -1.58
DDX42-211ENST00000580108 DCDC2CA8MYV0 355 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 CHL1O00533 1208 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 ENC1O14682 589 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 TREHO43280 583 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 NTSR2O95665 410 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 PDE6BP35913 854 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 ST5P78524 1137 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 HNRNPUQ00839 825 aaKnown RBP eCLIP5.17□□□□□ -1.58
DDX42-211ENST00000580108 NKPD1Q17RQ9 610 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 ANGEL2Q5VTE6 544 aaKnown RBP5.17□□□□□ -1.58
DDX42-211ENST00000580108 KIF6Q6ZMV9 814 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 COPS6Q7L5N1 327 aa5.17□□□□□ -1.58
DDX42-211ENST00000580108 ZNF34Q8IZ26 560 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms