RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 LILRB2Q8N423 598 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 NLGN2Q8NFZ4 835 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 DIO2Q92813 273 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 PTPRN2Q92932 1015 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 RNPC3Q96LT9 517 aaKnown RBP3.67□□□□□ -1.82
COPS3-213ENST00000577210 GPR27Q9NS67 375 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 AP5S1Q9NUS5 200 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 INTS7Q9NVH2 962 aaKnown RBP3.67□□□□□ -1.82
COPS3-213ENST00000577210 ZNF281Q9Y2X9 895 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 MRPS23Q9Y3D9 190 aaKnown RBP3.67□□□□□ -1.82
COPS3-213ENST00000577210 PRKAB1Q9Y478 270 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 PTCH2Q9Y6C5 1203 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 TAF6LQ9Y6J9 622 aa3.67□□□□□ -1.82
COPS3-213ENST00000577210 KCNQ2O43526 872 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 DIAPH1O60610 1272 aaKnown RBP3.66□□□□□ -1.82
COPS3-213ENST00000577210 MAFKO60675 156 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 FKTNO75072 461 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 PAPLNO95428 1278 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 NPTXRO95502 500 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 CAPNS1P04632 268 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 ZGLP1P0C6A0 271 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 FAM153BP0C7A2 387 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 CD96P40200 585 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 ECI1P42126 302 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 RPL11P62913 178 aaKnown RBP3.66□□□□□ -1.82
COPS3-213ENST00000577210 KIZQ2M2Z5 673 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 RTP2Q5QGT7 225 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 RNF187Q5TA31 235 aaPredicted RBP3.66□□□□□ -1.82
COPS3-213ENST00000577210 OLFML2BQ68BL8 750 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 GIMAP6Q6P9H5 292 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 ATG4DQ86TL0 474 aaPredicted RBP3.66□□□□□ -1.82
COPS3-213ENST00000577210 PPIL6Q8IXY8 311 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 IFNL3Q8IZI9 196 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.66□□□□□ -1.82
COPS3-213ENST00000577210 LINC01599Q8WXQ3 324 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 MYLIPQ8WY64 445 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 ALG1Q9BT22 464 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 CRTAC1Q9NQ79 661 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 FANCLQ9NW38 375 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 ERVK13-1Q9NX77 482 aa3.66□□□□□ -1.82
COPS3-213ENST00000577210 MRPL42Q9Y6G3 142 aaKnown RBP3.66□□□□□ -1.82
COPS3-213ENST00000577210 TMEM82A0PJX8 343 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 NRDCO43847 1150 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 SMARCA5O60264 1052 aaPredicted RBP3.65□□□□□ -1.83
COPS3-213ENST00000577210 DLX3O60479 287 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 HPXP02790 462 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 THBDP07204 575 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 PLS3P13797 630 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 IFNGR1P15260 489 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 RTP1P59025 263 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 CHRNA2Q15822 529 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 ZNF792Q3KQV3 632 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 TRIM61Q5EBN2 209 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 SLC35F1Q5T1Q4 408 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 STYK1Q6J9G0 422 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 CEP128Q6ZU80 1094 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 USP53Q70EK8 1073 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 TMEM145Q8NBT3 493 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 FLAD1Q8NFF5 587 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 NPLOC4Q8TAT6 608 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 KISS1RQ969F8 398 aaPredicted RBP3.65□□□□□ -1.83
COPS3-213ENST00000577210 ADAMTS10Q9H324 1103 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 RC3H2Q9HBD1 1191 aaKnown RBP3.65□□□□□ -1.83
COPS3-213ENST00000577210 NCOA5Q9HCD5 579 aaKnown RBP3.65□□□□□ -1.83
COPS3-213ENST00000577210 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.65□□□□□ -1.838e-7■■□□□ 11.5
COPS3-213ENST00000577210 SFMBT1Q9UHJ3 866 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 COA3Q9Y2R0 106 aaPredicted RBP3.65□□□□□ -1.83
COPS3-213ENST00000577210 TIMM13Q9Y5L4 95 aaPredicted RBP3.65□□□□□ -1.83
COPS3-213ENST00000577210 NPFFR2Q9Y5X5 522 aa3.65□□□□□ -1.83
COPS3-213ENST00000577210 CADPSQ9ULU8 1353 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 FADS2P1A8MWK0 482 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 H7BY64 318 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 ABLIM1O14639 778 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 JUNBP17275 347 aaPredicted RBP3.64□□□□□ -1.83
COPS3-213ENST00000577210 HK2P52789 917 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 GPR85P60893 370 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 JAG1P78504 1218 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 LSAMPQ13449 338 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 FAM47CQ5HY64 1035 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 MROH9Q5TGP6 573 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 JAZF1Q86VZ6 243 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 AHI1Q8N157 1196 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 USP33Q8TEY7 942 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 FRS2Q8WU20 508 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 NINJ1Q92982 152 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 OSBP2Q969R2 916 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 ASIC4Q96FT7 647 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 MAGEB10Q96LZ2 347 aaPredicted RBP3.64□□□□□ -1.83
COPS3-213ENST00000577210 SLC6A17Q9H1V8 727 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 PDLIM7Q9NR12 457 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 FAM53CQ9NYF3 392 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 MAGEC2Q9UBF1 373 aaPredicted RBP3.64□□□□□ -1.83
COPS3-213ENST00000577210 NUDT5Q9UKK9 219 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 ADAMTS6Q9UKP5 1117 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 MINPP1Q9UNW1 487 aa3.64□□□□□ -1.83
COPS3-213ENST00000577210 ESYT3A0FGR9 886 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 WASH4PA8MWX3 477 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 FAM47E-STBD1D6RA91 191 aa3.63□□□□□ -1.83
COPS3-213ENST00000577210 KRIT1O00522 736 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms