RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 RPS6P62753 249 aaKnown RBP16.67■□□□□ 0.26
ABR-223ENST00000573895 NKX3-2P78367 333 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 TRAF1Q13077 416 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 LRRC26Q2I0M4 334 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 C1orf53Q5VUE5 145 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 MCF2L2Q86YR7 1114 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 DNERQ8NFT8 737 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
ABR-223ENST00000573895 UPF3BQ9BZI7 483 aaKnown RBP16.67■□□□□ 0.26
ABR-223ENST00000573895 RIOX1Q9H6W3 641 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 VTA1Q9NP79 307 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 PHF24Q9UPV7 400 aa16.67■□□□□ 0.26
ABR-223ENST00000573895 B4DLN1 442 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 ZBTB5O15062 677 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 PRC1O43663 620 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 DHX16O60231 1041 aaKnown RBP16.66■□□□□ 0.26
ABR-223ENST00000573895 CST5P28325 142 aaPredicted RBP16.66■□□□□ 0.26
ABR-223ENST00000573895 LIFRP42702 1097 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 ALDH5A1P51649 535 aaPredicted RBP16.66■□□□□ 0.26
ABR-223ENST00000573895 MRPL12P52815 198 aaKnown RBP16.66■□□□□ 0.26
ABR-223ENST00000573895 BECN1Q14457 450 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 SNX17Q15036 470 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 USH1GQ495M9 461 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 CHST3Q7LGC8 479 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 FBXO11Q86XK2 927 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 C7orf61Q8IZ16 206 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 KLHDC9Q8NEP7 349 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 AMNQ9BXJ7 453 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 UPF3AQ9H1J1 476 aaKnown RBP16.66■□□□□ 0.26
ABR-223ENST00000573895 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 SPC25Q9HBM1 224 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 MRPL11Q9Y3B7 192 aaKnown RBP16.66■□□□□ 0.26
ABR-223ENST00000573895 SYNRGQ9UMZ2 1314 aa16.66■□□□□ 0.26
ABR-223ENST00000573895 MOXD2PA6NHM9 499 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 DDAH1O94760 285 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 PGK1P00558 417 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 GJA9P57773 515 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 SLC39A5Q6ZMH5 540 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 SAMD3Q8N6K7 520 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 PCSK9Q8NBP7 692 aaKnown RBP16.65■□□□□ 0.26
ABR-223ENST00000573895 PRO3102Q9H379 93 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 VAT1LQ9HCJ6 419 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 MAP3K20Q9NYL2 800 aaKnown RBP16.65■□□□□ 0.26
ABR-223ENST00000573895 COLQQ9Y215 455 aaPredicted RBP16.65■□□□□ 0.26
ABR-223ENST00000573895 Q9Y3F1 56 aa16.65■□□□□ 0.26
ABR-223ENST00000573895 SH2B2O14492 632 aaPredicted RBP16.64■□□□□ 0.25
ABR-223ENST00000573895 ADCY6O43306 1168 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 EDNRBP24530 442 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 CALML3P27482 149 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 KIF5BP33176 963 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 ADCYAP1R1P41586 468 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 FGD1P98174 961 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 GHRHRQ02643 423 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 TNFAIP2Q03169 654 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 HABP4Q5JVS0 413 aaKnown RBP16.64■□□□□ 0.25
ABR-223ENST00000573895 CCSAPQ6IQ19 270 aaPredicted RBP16.64■□□□□ 0.25
ABR-223ENST00000573895 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.25
ABR-223ENST00000573895 PURBQ96QR8 312 aaKnown RBP16.64■□□□□ 0.25
ABR-223ENST00000573895 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
ABR-223ENST00000573895 A0A1W2PPC1 479 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
ABR-223ENST00000573895 CALM1P0DP23 149 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 CALM2P0DP24 149 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 CALM3P0DP25 149 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 CPA1P15085 419 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 SGMS1Q86VZ5 419 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 LENG1Q96BZ8 264 aaPredicted RBP16.63■□□□□ 0.25
ABR-223ENST00000573895 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
ABR-223ENST00000573895 LZTS2Q9BRK4 669 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 AGXT2Q9BYV1 514 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
ABR-223ENST00000573895 KIAA1217Q5T5P2 1943 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 PNMA6FA0A0J9YX94 578 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 A0A1W2PQ45 241 aaPredicted RBP16.62■□□□□ 0.25
ABR-223ENST00000573895 A0A1W2PQY0 241 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 RBM47A0AV96 593 aaKnown RBP16.62■□□□□ 0.25
ABR-223ENST00000573895 CCDC69A6NI79 296 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 CYTH3O43739 400 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 BMP8BP34820 402 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 GNAQP50148 359 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 ACLYP53396 1101 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 ATN1P54259 1190 aaPredicted RBP16.62■□□□□ 0.25
ABR-223ENST00000573895 RTP1P59025 263 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 KCNA10Q16322 511 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 Q6ZUG5 572 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 CTCFLQ8NI51 663 aaPredicted RBP16.62■□□□□ 0.25
ABR-223ENST00000573895 GDF15Q99988 308 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 SPZ1Q9BXG8 430 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 PCDHA1Q9Y5I3 950 aa16.62■□□□□ 0.25
ABR-223ENST00000573895 ELP1O95163 1332 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms