RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 NAT16Q8N8M0 369 aa6.68□□□□□ -1.34
LINC00560-201ENST00000564593 BSDC1Q9NW68 430 aaPredicted RBP6.68□□□□□ -1.34
LINC00560-201ENST00000564593 TMEFF2Q9UIK5 374 aaPredicted RBP6.68□□□□□ -1.34
LINC00560-201ENST00000564593 TRAF6Q9Y4K3 522 aa6.68□□□□□ -1.34
LINC00560-201ENST00000564593 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.67□□□□□ -1.34
LINC00560-201ENST00000564593 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
LINC00560-201ENST00000564593 PAMP19021 973 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 SDSP20132 328 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 IBSPP21815 317 aaPredicted RBP6.67□□□□□ -1.34
LINC00560-201ENST00000564593 IQCEQ6IPM2 695 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 STYK1Q6J9G0 422 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 KCNT2Q6UVM3 1135 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 BRAPQ7Z569 592 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 DTX1Q86Y01 620 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 STK11IPQ8N1F8 1099 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 GSTCDQ8NEC7 633 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 ZCRB1Q8TBF4 217 aaKnown RBP6.67□□□□□ -1.34
LINC00560-201ENST00000564593 SYTL4Q96C24 671 aaPredicted RBP6.67□□□□□ -1.34
LINC00560-201ENST00000564593 GPATCH3Q96I76 525 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 PTCHD1Q96NR3 888 aa6.67□□□□□ -1.34
LINC00560-201ENST00000564593 ASXL2Q76L83 1435 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 TRBV23OR9-2A0A075B6M9 112 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 ARNTLO00327 626 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 TBC1D8O95759 1140 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 LTBRP36941 435 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 CD96P40200 585 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 CCDC103Q8IW40 242 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 DIO2Q92813 273 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 MAGEB10Q96LZ2 347 aaPredicted RBP6.66□□□□□ -1.34
LINC00560-201ENST00000564593 PHF20Q9BVI0 1012 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 TRIM39Q9HCM9 518 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 MAGEC2Q9UBF1 373 aaPredicted RBP6.66□□□□□ -1.34
LINC00560-201ENST00000564593 SLC5A6Q9Y289 635 aa6.66□□□□□ -1.34
LINC00560-201ENST00000564593 AQP7O14520 342 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 WNT11O96014 354 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 APPP05067 770 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 KCNAB2Q13303 367 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 RSPO2Q6UXX9 243 aaPredicted RBP6.65□□□□□ -1.34
LINC00560-201ENST00000564593 CPNE8Q86YQ8 564 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 ANKRD13AQ8IZ07 590 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 BCL7CQ8WUZ0 217 aaPredicted RBP6.65□□□□□ -1.34
LINC00560-201ENST00000564593 MMP19Q99542 508 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 CARS2Q9HA77 564 aaKnown RBP6.65□□□□□ -1.34
LINC00560-201ENST00000564593 INTS7Q9NVH2 962 aaKnown RBP6.65□□□□□ -1.34
LINC00560-201ENST00000564593 ADGRE2Q9UHX3 823 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 ZNF281Q9Y2X9 895 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 COL4A3BPQ9Y5P4 624 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 NPFFR2Q9Y5X5 522 aa6.65□□□□□ -1.34
LINC00560-201ENST00000564593 DNAJC8O75937 253 aaPredicted RBP6.65□□□□□ -1.35
LINC00560-201ENST00000564593 CRTAMO95727 393 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 HMGB1P09429 215 aaKnown RBP6.65□□□□□ -1.35
LINC00560-201ENST00000564593 HSP90B1P14625 803 aaKnown RBP6.65□□□□□ -1.35
LINC00560-201ENST00000564593 LAPTM5Q13571 262 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 TESK1Q15569 626 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 CNNM4Q6P4Q7 775 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 CYP2R1Q6VVX0 501 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 FGD2Q7Z6J4 655 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 LRRTM3Q86VH5 581 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 IFNL3Q8IZI9 196 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 SCLYQ96I15 445 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 FCRL2Q96LA5 508 aaPredicted RBP6.65□□□□□ -1.35
LINC00560-201ENST00000564593 ZFYVE21Q9BQ24 234 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 GPR27Q9NS67 375 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 ERVK13-1Q9NX77 482 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 LMCD1Q9NZU5 365 aa6.65□□□□□ -1.35
LINC00560-201ENST00000564593 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 A0A087X0B3 334 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 PDE8AO60658 829 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 CD8BP10966 210 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 LCP1P13796 627 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 GUCY1A3Q02108 690 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 ZP2Q05996 745 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 ANGEL2Q5VTE6 544 aaKnown RBP6.64□□□□□ -1.35
LINC00560-201ENST00000564593 MTDHQ86UE4 582 aaKnown RBP6.64□□□□□ -1.35
LINC00560-201ENST00000564593 TMEM52Q8NDY8 209 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 BRINP2Q9C0B6 783 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 PCDHA9Q9Y5H5 950 aa6.64□□□□□ -1.35
LINC00560-201ENST00000564593 TNPO3Q9Y5L0 923 aaKnown RBP6.64□□□□□ -1.35
LINC00560-201ENST00000564593 OPA1O60313 960 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 RASGRP1O95267 797 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 ASLP04424 464 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
LINC00560-201ENST00000564593 NAT1P18440 290 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 GPR85P60893 370 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 INF2Q27J81 1249 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 HLA-DQA1Q5Y7H0 255 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 MBLAC2Q68D91 279 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 KRT26Q7Z3Y9 468 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 SPRED2Q7Z698 418 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 THNSL2Q86YJ6 484 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 RCBTB1Q8NDN9 531 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 CHAC2Q8WUX2 184 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
LINC00560-201ENST00000564593 PCDH12Q9NPG4 1184 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 NOP58Q9Y2X3 529 aaKnown RBP6.63□□□□□ -1.35
LINC00560-201ENST00000564593 PCDHA8Q9Y5H6 950 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 PCDHA2Q9Y5H9 948 aa6.63□□□□□ -1.35
LINC00560-201ENST00000564593 TCRBV16S1A1N1A0A5B0 115 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 MSCO60682 206 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 CNGA1P29973 690 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms