RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 NSUN3Q9H649 340 aaKnown RBP7.23□□□□□ -1.25
USP8-218ENST00000561330 PDLIM7Q9NR12 457 aa7.23□□□□□ -1.25
USP8-218ENST00000561330 ARHGEF4Q9NR80 690 aa7.23□□□□□ -1.25
USP8-218ENST00000561330 TRAV20A0A0B4J274 112 aa7.22□□□□□ -1.25
USP8-218ENST00000561330 MEFVO15553 781 aaPredicted RBP7.22□□□□□ -1.25
USP8-218ENST00000561330 PRODHO43272 600 aa7.22□□□□□ -1.25
USP8-218ENST00000561330 FGFR1P11362 822 aa7.22□□□□□ -1.25
USP8-218ENST00000561330 MAP4K2Q12851 820 aa7.22□□□□□ -1.25
USP8-218ENST00000561330 NFE2L2Q16236 605 aa7.22□□□□□ -1.25
USP8-218ENST00000561330 PRSS53Q2L4Q9 553 aa7.22□□□□□ -1.25
USP8-218ENST00000561330 E4F1Q66K89 784 aaPredicted RBP7.22□□□□□ -1.25
USP8-218ENST00000561330 EPB41L4BQ9H329 900 aa7.22□□□□□ -1.25
USP8-218ENST00000561330 DCP1AQ9NPI6 582 aaPredicted RBP7.22□□□□□ -1.25
USP8-218ENST00000561330 OR14I1A6ND48 311 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 DIAPH1O60610 1272 aaKnown RBP7.21□□□□□ -1.26
USP8-218ENST00000561330 MSL3P1P0C860 447 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 KCNAB2Q13303 367 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 BMS1Q14692 1282 aaKnown RBP7.21□□□□□ -1.26
USP8-218ENST00000561330 ACBD5Q5T8D3 534 aaPredicted RBP7.21□□□□□ -1.26
USP8-218ENST00000561330 BICRALQ6AI39 1079 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 NSMFQ6X4W1 530 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 PPIL6Q8IXY8 311 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 KREMEN2Q8NCW0 462 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 DIO2Q92813 273 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 DNAJC7Q99615 494 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 LNPKQ9C0E8 428 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 ZSWIM4Q9H7M6 989 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 KDM2BQ8NHM5 1336 aa7.21□□□□□ -1.26
USP8-218ENST00000561330 C7orf72A4D263 438 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 DLX3O60479 287 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 MPOP05164 745 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 PABPC1P11940 636 aaKnown RBP7.2□□□□□ -1.26
USP8-218ENST00000561330 SDHBP21912 280 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 TACR1P25103 407 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 TXKP42681 527 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 ERVFRD-1P60508 538 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 SLC35F1Q5T1Q4 408 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 MBLAC2Q68D91 279 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 LZTR1Q8N653 840 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 ZBTB38Q8NAP3 1195 aaPredicted RBP7.2□□□□□ -1.26
USP8-218ENST00000561330 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 CDC6Q99741 560 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 USP35Q9P2H5 1018 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 GULP1Q9UBP9 304 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
USP8-218ENST00000561330 RWDD3Q9Y3V2 267 aa7.2□□□□□ -1.26
USP8-218ENST00000561330 ADCY3O60266 1144 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 FARP2O94887 1054 aaPredicted RBP7.19□□□□□ -1.26
USP8-218ENST00000561330 LTBRP36941 435 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 TESK1Q15569 626 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 INF2Q27J81 1249 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 CCDC144BQ3MJ40 725 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 YOD1Q5VVQ6 348 aaPredicted RBP7.19□□□□□ -1.26
USP8-218ENST00000561330 DENND5AQ6IQ26 1287 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 OGFOD2Q6N063 350 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 ZNF605Q86T29 641 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 CCDC103Q8IW40 242 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 USP33Q8TEY7 942 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 OSBP2Q969R2 916 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 MRFAP1L1Q96HT8 127 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 IPO9Q96P70 1041 aaKnown RBP7.19□□□□□ -1.26
USP8-218ENST00000561330 TNFRSF12AQ9NP84 129 aa7.19□□□□□ -1.26
USP8-218ENST00000561330 CDK11AQ9UQ88 783 aaPredicted RBP7.19□□□□□ -1.26
USP8-218ENST00000561330 ARNTLO00327 626 aa7.18□□□□□ -1.26
USP8-218ENST00000561330 MYO1BO43795 1136 aa7.18□□□□□ -1.26
USP8-218ENST00000561330 FAM153BP0C7A2 387 aa7.18□□□□□ -1.26
USP8-218ENST00000561330 TMEM62Q0P6H9 643 aa7.18□□□□□ -1.26
USP8-218ENST00000561330 RAB3GAP1Q15042 981 aa7.18□□□□□ -1.26
USP8-218ENST00000561330 USP53Q70EK8 1073 aa7.18□□□□□ -1.26
USP8-218ENST00000561330 CABP7Q86V35 215 aa7.18□□□□□ -1.26
USP8-218ENST00000561330 FBXO15Q8NCQ5 510 aaPredicted RBP7.18□□□□□ -1.26
USP8-218ENST00000561330 ZNF552Q9H707 407 aaPredicted RBP7.18□□□□□ -1.26
USP8-218ENST00000561330 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP8-218ENST00000561330 TIMM13Q9Y5L4 95 aaPredicted RBP7.18□□□□□ -1.26
USP8-218ENST00000561330 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 ABLIM1O14639 778 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 PPP1R11O60927 126 aaPredicted RBP7.17□□□□□ -1.26
USP8-218ENST00000561330 CYBBP04839 570 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 GTF2A2P52657 109 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 RPL11P62913 178 aaKnown RBP7.17□□□□□ -1.26
USP8-218ENST00000561330 LONRF2Q1L5Z9 754 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 OLFML2BQ68BL8 750 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 SCUBE1Q8IWY4 988 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 POU5F2Q8N7G0 328 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 DPF3Q92784 378 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 FAM84AQ96KN4 292 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 MTA3Q9BTC8 594 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 BTG4Q9NY30 223 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 MARCH2Q9P0N8 246 aa7.17□□□□□ -1.26
USP8-218ENST00000561330 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 HRKO00198 91 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 SRGAP3O43295 1099 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 PEX10O60683 326 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 FUCA1P04066 466 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 YBX1P67809 324 aaKnown RBP7.16□□□□□ -1.26
USP8-218ENST00000561330 MESP2Q0VG99 397 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 NR1I3Q14994 352 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 PAQR3Q6TCH7 311 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 DPH6Q7L8W6 267 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 RCBTB1Q8NDN9 531 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms