RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 PRPF3O43395 683 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 SNAI1O95863 264 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 CFBP00751 764 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 CCL5P13501 91 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 GHRHRQ02643 423 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 SCRN1Q12765 414 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 RABEP1Q15276 862 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 PKN1Q16512 942 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 PRAMEF19Q5SWL8 479 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 MSL3Q8N5Y2 521 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 TRPV1Q8NER1 839 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 SYTL5Q8TDW5 730 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 PHKBQ93100 1093 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
RABGGTA-218ENST00000560777 PLXNA1Q9UIW2 1896 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 LARGE1O95461 756 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 CCND3P30281 292 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 HSD17B4P51659 736 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 WWC2Q6AWC2 1192 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 SAMD3Q8N6K7 520 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 NECAB1Q8N987 351 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 TAAR1Q96RJ0 339 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 RNF208Q9H0X6 261 aa13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 HMX1Q9NP08 348 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 MAP3K20Q9NYL2 800 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 DDX49Q9Y6V7 483 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-218ENST00000560777 ASB14A6NK59 587 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 CPLX1O14810 134 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 CYBAP13498 195 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 TYW1BQ6NUM6 668 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 ARMCX2Q7L311 632 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 HEATR3Q7Z4Q2 680 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 SLC26A6Q9BXS9 759 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 RNF26Q9BY78 433 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 PAK6Q9NQU5 681 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 ADD3Q9UEY8 706 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 LIMCH1Q9UPQ0 1083 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 SYNGAP1Q96PV0 1343 aa13.78□□□□□ -0.2
RABGGTA-218ENST00000560777 GCOM1H8Y6P7 765 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 STXBP3O00186 592 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 MEIS2O14770 477 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 CTDNEP1O95476 244 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 GJB1P08034 283 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 LCTP09848 1927 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 POLR2MP0CAP2 368 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 ZNF865P0CJ78 1059 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 SCG2P13521 617 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 ALDH5A1P51649 535 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 CPLX2Q6PUV4 134 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 IL27Q8NEV9 243 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 DNERQ8NFT8 737 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 MORC4Q8TE76 937 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 NRBP1Q9UHY1 535 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 BRCA2P51587 3418 aa13.77□□□□□ -0.21
RABGGTA-218ENST00000560777 LOC102724159A0A0B4J2E5 919 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 hCG_1984214I3L0E3 225 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 PIK3CDO00329 1044 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 DTNBO60941 627 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 AKAP17AQ02040 695 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 ACVR2BQ13705 512 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 PWP2Q15269 919 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 LHX8Q68G74 356 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 ZNF713Q8N859 430 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 NSUN6Q8TEA1 469 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 GTF3C6Q969F1 213 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 DEFB118Q96PH6 123 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 RMDN3Q96TC7 470 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
RABGGTA-218ENST00000560777 KIAA0100Q14667 2235 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 ST18O60284 1047 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 SGPL1O95470 568 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 EDNRBP24530 442 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 CNGA1P29973 690 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 GJA8P48165 433 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 NAPAP54920 295 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 SOX10P56693 466 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms