RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 ZNF792Q3KQV3 632 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 USP28Q96RU2 1077 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 MROH8Q9H579 483 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 FAM133AQ8N9E0 248 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 VPS37CA5D8V6 355 aaPredicted RBP13.19□□□□□ -0.3
RORA-207ENST00000558234 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
RORA-207ENST00000558234 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
RORA-207ENST00000558234 C8orf76Q96K31 380 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 TRIM47Q96LD4 638 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 FTOQ9C0B1 505 aaKnown RBP eCLIP13.19□□□□□ -0.3
RORA-207ENST00000558234 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 NFIBO00712 420 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 FERMT3Q86UX7 667 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 LINC00301Q8NCQ3 95 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
RORA-207ENST00000558234 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 AXDND1Q5T1B0 1012 aaPredicted RBP13.19□□□□□ -0.3
RORA-207ENST00000558234 GAS2L3Q86XJ1 694 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
RORA-207ENST00000558234 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 STAT3P40763 770 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 GSE1Q14687 1217 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
RORA-207ENST00000558234 SLC26A6Q9BXS9 759 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 ARHGAP39Q9C0H5 1083 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 LOC102724159A0A0B4J2E5 919 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 GPR25O00155 361 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 ZBED4O75132 1171 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 ERCC3P19447 782 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 PWP2Q15269 919 aaKnown RBP13.18□□□□□ -0.3
RORA-207ENST00000558234 SNRNP48Q6IEG0 339 aaKnown RBP13.18□□□□□ -0.3
RORA-207ENST00000558234 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
RORA-207ENST00000558234 PTPREP23469 700 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 MAMDC4Q6UXC1 1216 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 MBOAT7Q96N66 472 aa13.18□□□□□ -0.3
RORA-207ENST00000558234 WNT7AO00755 349 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 FAM184AQ8NB25 1140 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.3
RORA-207ENST00000558234 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
RORA-207ENST00000558234 DIS3Q9Y2L1 958 aaKnown RBP13.17□□□□□ -0.3
RORA-207ENST00000558234 KIF3AQ9Y496 699 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 hCG_1642624A0A1W2PR95 340 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 MAPK4P31152 587 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 KRT85P78386 507 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 IRF5Q13568 498 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 TBC1D5Q92609 795 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 COA7Q96BR5 231 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
RORA-207ENST00000558234 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 FOXN1O15353 648 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 COBLO75128 1261 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 YEATS4O95619 227 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
RORA-207ENST00000558234 WASF1Q92558 559 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 PFASO15067 1338 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 GNRH1P01148 92 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 ACAD9Q9H845 621 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 CCPG1Q9ULG6 757 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 MBD3O95983 291 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 GALNT17Q6IS24 598 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 CCDC174Q6PII3 467 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 C4orf32Q8N8J7 132 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 PCDHA6Q9UN73 950 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 PCDHA8Q9Y5H6 950 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
RORA-207ENST00000558234 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
RORA-207ENST00000558234 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
RORA-207ENST00000558234 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 CPLX1O14810 134 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 STRNO43815 780 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 TRPA1O75762 1119 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 GUCY1B3Q02153 619 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 OLFML2BQ68BL8 750 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 FLRT1Q9NZU1 646 aa13.15□□□□□ -0.3
RORA-207ENST00000558234 FBXO40Q9UH90 709 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms