RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 IQCEQ6IPM2 695 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 RSPO2Q6UXX9 243 aaPredicted RBP4.92□□□□□ -1.62
SRP54-209ENST00000555746 SYTL4Q96C24 671 aaPredicted RBP4.92□□□□□ -1.62
SRP54-209ENST00000555746 CCDC120Q96HB5 630 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 MAP6Q96JE9 813 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 FEZ1Q99689 392 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 GPRC5CQ9NQ84 441 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 EBF1Q9UH73 591 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 TMEM59LQ9UK28 342 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 SMARCA4P51532 1647 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 GAPVD1Q14C86 1478 aa4.92□□□□□ -1.62
SRP54-209ENST00000555746 MEFVO15553 781 aaPredicted RBP4.91□□□□□ -1.62
SRP54-209ENST00000555746 ASMTLO95671 621 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 TBC1D8O95759 1140 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 PLS3P13797 630 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 GABREP78334 506 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 RBM10P98175 930 aaKnown RBP4.91□□□□□ -1.62
SRP54-209ENST00000555746 KCNAB2Q13303 367 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 TKFCQ3LXA3 575 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 RALGPS1Q5JS13 557 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 HLA-DQA1Q5Y7H0 255 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 STYK1Q6J9G0 422 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 MAMDC2Q7Z304 686 aaPredicted RBP4.91□□□□□ -1.62
SRP54-209ENST00000555746 PPIL6Q8IXY8 311 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 FAM177A1Q8N128 213 aaPredicted RBP4.91□□□□□ -1.62
SRP54-209ENST00000555746 ANKS4BQ8N8V4 417 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 GSTCDQ8NEC7 633 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 DCAF4Q8WV16 495 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 PTPRN2Q92932 1015 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 HHIPL1Q96JK4 782 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 ZFYVE21Q9BQ24 234 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 ADAMTS10Q9H324 1103 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 SLAMF8Q9P0V8 285 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 TMEFF2Q9UIK5 374 aaPredicted RBP4.91□□□□□ -1.62
SRP54-209ENST00000555746 CLASP1Q7Z460 1538 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 DCAF1Q9Y4B6 1507 aa4.91□□□□□ -1.62
SRP54-209ENST00000555746 NPHP3-ACAD11A0A0J9YXS1 232 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 A0A1W2PQ45 241 aaPredicted RBP4.9□□□□□ -1.63
SRP54-209ENST00000555746 A0A1W2PQY0 241 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 PPP1R12AO14974 1030 aaPredicted RBP4.9□□□□□ -1.63
SRP54-209ENST00000555746 EFCAB14O75071 495 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 CLSTN1O94985 981 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 GDNFP39905 211 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 NR0B2Q15466 257 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 ARTNQ5T4W7 220 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 USP53Q70EK8 1073 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 SLCO6A1Q86UG4 719 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 CCDC103Q8IW40 242 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 NAT16Q8N8M0 369 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 PDZD8Q8NEN9 1154 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 NLGN2Q8NFZ4 835 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 PI4K2BQ8TCG2 481 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 SP110Q9HB58 689 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 PRDM7Q9NQW5 492 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 GPR27Q9NS67 375 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 MBNL3Q9NUK0 354 aaKnown RBP4.9□□□□□ -1.63
SRP54-209ENST00000555746 C19orf73Q9NVV2 129 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 CLEC1BQ9P126 229 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 ADAMTS6Q9UKP5 1117 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 PLAAQ9Y263 795 aa4.9□□□□□ -1.63
SRP54-209ENST00000555746 HPXP02790 462 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 RNASE1P07998 156 aaKnown RBP4.89□□□□□ -1.63
SRP54-209ENST00000555746 LTBRP36941 435 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 CHRNEQ04844 493 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 PLCL1Q15111 1095 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 INF2Q27J81 1249 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 SPPL2CQ8IUH8 684 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 TP53INP2Q8IXH6 220 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 DIO2Q92813 273 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 TMX1Q9H3N1 280 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 SLC52A2Q9HAB3 445 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 SBNO2Q9Y2G9 1366 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 ASXL2Q76L83 1435 aa4.89□□□□□ -1.63
SRP54-209ENST00000555746 ABCC10Q5T3U5 1492 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 BAZ1BQ9UIG0 1483 aaKnown RBP4.88□□□□□ -1.63
SRP54-209ENST00000555746 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.88□□□□□ -1.63
SRP54-209ENST00000555746 BLACEA4D250 179 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 FITM1A5D6W6 292 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 NOTOA8MTQ0 251 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 AQP7O14520 342 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 NRDCO43847 1150 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 CORO7P57737 925 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 GPR85P60893 370 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 PABPC4Q13310 644 aaKnown RBP eCLIP4.88□□□□□ -1.63
SRP54-209ENST00000555746 CBX2Q14781 532 aaPredicted RBP4.88□□□□□ -1.63
SRP54-209ENST00000555746 DALRD3Q5D0E6 543 aaKnown RBP4.88□□□□□ -1.63
SRP54-209ENST00000555746 MBLAC2Q68D91 279 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 CPNE8Q86YQ8 564 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 OXR1Q8N573 874 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 RCBTB1Q8NDN9 531 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 SLC7A14Q8TBB6 771 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 NINJ1Q92982 152 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 ASIC4Q96FT7 647 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 CLUHP3Q96NS8 147 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 JMJD8Q96S16 334 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 PHF20Q9BVI0 1012 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 TRIM39Q9HCM9 518 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 SFMBT1Q9UHJ3 866 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 CD2APQ9Y5K6 639 aa4.88□□□□□ -1.63
SRP54-209ENST00000555746 IFT140Q96RY7 1462 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms