RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 EIF4A3P38919 411 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 DHX40Q8IX18 779 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 AATFQ9NY61 560 aaKnown RBP eCLIP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 SRPRBQ9Y5M8 271 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 ADGRG1Q9Y653 693 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 KIF1CO43896 1103 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 KCNJ6P48051 423 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 FAM47AQ5JRC9 791 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 FAM26FQ5R3K3 315 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 RNF26Q9BY78 433 aaPredicted RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 SLC24A3Q9HC58 644 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 USH1CQ9Y6N9 552 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 ARHGEF35A5YM69 484 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 IFNB1P01574 187 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 CCZ1BP86790 482 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 CCZ1P86791 482 aaPredicted RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 PDE1CQ14123 709 aaPredicted RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 POLA2Q14181 598 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 PSMD1Q99460 953 aa17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 DDX23Q9BUQ8 820 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-212ENST00000550418 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 SEMA3EO15041 775 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 POLE2P56282 527 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 MAN2A1Q16706 1144 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 DCUN1D2Q6PH85 259 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 CUEDC2Q9H467 287 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 RIC8AQ9NPQ8 531 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 ATP7BP35670 1465 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 MMP1P03956 469 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 EIF3BP55884 814 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 NR5A1Q13285 461 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 ADAM9Q13443 819 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 GSDMBQ8TAX9 411 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 WDR24Q96S15 920 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 PPP1R9AQ9ULJ8 1098 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 ACTN3Q08043 901 aaPredicted RBP17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 GPBP1Q86WP2 473 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 SCYL3Q8IZE3 742 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 PCDHA13Q9Y5I0 950 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 SMTNP53814 917 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 MRPS25P82663 173 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
RBFOX1-212ENST00000550418 KDM3AQ9Y4C1 1321 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 USP17L12C9JPN9 530 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 USP17L21D6R901 530 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 SRGAP2O75044 1071 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 SKIP12755 728 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 UBE3CQ15386 1083 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 ZNF772Q68DY9 489 aaPredicted RBP17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 CTAGE3PQ8IX95 158 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 DDX27Q96GQ7 796 aaKnown RBP17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 PBKQ96KB5 322 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 Q9H521 79 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 METTL14Q9HCE5 456 aaKnown RBP17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 TXLNGQ9NUQ3 528 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 E9PCH4 1651 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 IGSF1Q8N6C5 1336 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 ANO9A1A5B4 782 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 PROSER3Q2NL68 480 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 KSR1Q8IVT5 923 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 NEK9Q8TD19 979 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.36
RBFOX1-212ENST00000550418 IFNAR1P17181 557 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 KIF11P52732 1056 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 DIXDC1Q155Q3 683 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 HSP90AA5PQ58FG0 334 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 PALM2Q8IXS6 379 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 COG1Q8WTW3 980 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 AIFM3Q96NN9 605 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 UIMC1Q96RL1 719 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 HIBADHP31937 336 aaKnown RBP17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 PHBP35232 272 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 RNASELQ05823 741 aaKnown RBP17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 EXOC3L4Q17RC7 722 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 TCP11X2Q5H9J9 407 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 RESP18Q5W5W9 173 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 NEK8Q86SG6 692 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 TSC22D3Q99576 134 aa17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.35
RBFOX1-212ENST00000550418 ATF2P15336 505 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 CUL1Q13616 776 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 IQCB1Q15051 598 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 ARHGEF18Q6ZSZ5 1173 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 CCDC89Q8N998 374 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 FBXO41Q8TF61 875 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 PAGE5Q96GU1 130 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 PLAAQ9Y263 795 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 APBA3O96018 575 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 USP14P54578 494 aa17.26■□□□□ 0.35
RBFOX1-212ENST00000550418 GALNT17Q6IS24 598 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms