RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 DNERQ8NFT8 737 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 LRRC2Q9BYS8 371 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 RIOX1Q9H6W3 641 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 SPC25Q9HBM1 224 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 PHF24Q9UPV7 400 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 DDX49Q9Y6V7 483 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 TRIOBPQ9H2D6 2365 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 LTBP2Q14767 1821 aa20■□□□□ 0.79
CHMP1A-208ENST00000550102 B4DLN1 442 aa20■□□□□ 0.79
CHMP1A-208ENST00000550102 ADCY6O43306 1168 aa20■□□□□ 0.79
CHMP1A-208ENST00000550102 PPP1R11O60927 126 aaPredicted RBP20■□□□□ 0.79
CHMP1A-208ENST00000550102 ADCYAP1R1P41586 468 aa20■□□□□ 0.79
CHMP1A-208ENST00000550102 MRPL12P52815 198 aaKnown RBP20■□□□□ 0.79
CHMP1A-208ENST00000550102 SPZ1Q9BXG8 430 aa20■□□□□ 0.79
CHMP1A-208ENST00000550102 UPF3AQ9H1J1 476 aaKnown RBP20■□□□□ 0.79
CHMP1A-208ENST00000550102 SLC12A7Q9Y666 1083 aa20■□□□□ 0.79
CHMP1A-208ENST00000550102 CYTH3O43739 400 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 HMGB1P09429 215 aaKnown RBP19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 CST5P28325 142 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 GNAQP50148 359 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 ATN1P54259 1190 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 TNFAIP2Q03169 654 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 PDE4DQ08499 809 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 ADCK5Q3MIX3 580 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 DHX32Q7L7V1 743 aaKnown RBP19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 EEPD1Q7L9B9 569 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 SGMS1Q86VZ5 419 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 PIGSQ96S52 555 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 LZTS2Q9BRK4 669 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 PCDHA1Q9Y5I3 950 aa19.99■□□□□ 0.79
CHMP1A-208ENST00000550102 PNMA6FA0A0J9YX94 578 aa19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 C6orf222P0C671 652 aaPredicted RBP19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 EDNRBP24530 442 aa19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 HSPA4P34932 840 aa19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 NOL8Q76FK4 1167 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 MICU3Q86XE3 530 aa19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 KCNB2Q92953 911 aa19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 TSEN34Q9BSV6 310 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-208ENST00000550102 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 CFBP00751 764 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 GJA9P57773 515 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 RTP1P59025 263 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 TAPT1Q6NXT6 567 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 APOA5Q6Q788 366 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 SYNE3Q6ZMZ3 975 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 TLK2Q86UE8 772 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 KLHDC9Q8NEP7 349 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 SYTL5Q8TDW5 730 aaPredicted RBP19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 FERMT2Q96AC1 680 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 RRP36Q96EU6 259 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 TCEANC2Q96MN5 208 aa19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-208ENST00000550102 A0A1W2PQ45 241 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 A0A1W2PQY0 241 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 MYADML2A6NDP7 307 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 MOXD2PA6NHM9 499 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 OPLAHO14841 1288 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 EPB41L2O43491 1005 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 RXRAP19793 462 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 SMARCA1P28370 1054 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 HSD17B4P51659 736 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 ACLYP53396 1101 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 EXOSC10Q01780 885 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 GHRHRQ02643 423 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 SNX17Q15036 470 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 IQSEC1Q6DN90 963 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 SLC39A5Q6ZMH5 540 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 PCSK9Q8NBP7 692 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 NSUN6Q8TEA1 469 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 JAKMIP1Q96N16 626 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 PDGFCQ9NRA1 345 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 COL20A1Q9P218 1284 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 ZMYND8Q9ULU4 1186 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 SNX14Q9Y5W7 946 aa19.96■□□□□ 0.79
CHMP1A-208ENST00000550102 RANBP2P49792 3224 aaKnown RBP19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 PLEKHA8P1O95397 391 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 SMPD1P17405 629 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 CHRDL2Q6WN34 429 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 RAB11FIP4Q86YS3 637 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 SAMD3Q8N6K7 520 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 PIBF1Q8WXW3 757 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 TBC1D5Q92609 795 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 RMDN3Q96TC7 470 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 AP5M1Q9H0R1 490 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 MAP3K20Q9NYL2 800 aaKnown RBP19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 GNEQ9Y223 722 aaKnown RBP19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 ATP11BQ9Y2G3 1177 aa19.95■□□□□ 0.78
CHMP1A-208ENST00000550102 NKX3-2P78367 333 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 FGD1P98174 961 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 KCNA10Q16322 511 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 TRIM60Q495X7 471 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 GNASQ5JWF2 1037 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 C1orf53Q5VUE5 145 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 CCSAPQ6IQ19 270 aaPredicted RBP19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 BLOC1S2Q6QNY1 142 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 TMTC3Q6ZXV5 915 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 FANCBQ8NB91 859 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 SCFD2Q8WU76 684 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 TAAR1Q96RJ0 339 aa19.94■□□□□ 0.78
CHMP1A-208ENST00000550102 IWS1Q96ST2 819 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms