RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MEIS1O00470 390 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 BUB1O43683 1085 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 TRAPPC10P48553 1259 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 CCDC40Q4G0X9 1142 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 SV2BQ7L1I2 683 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 RRAGAQ7L523 313 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 FCHSD1Q86WN1 690 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 DNAAF5Q86Y56 855 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 ADSSL1Q8N142 457 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 JAKMIP2Q96AA8 810 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 LRRC4BQ9NT99 713 aa15.27■□□□□ 0.03
PRPF40B-209ENST00000548825 ATP1A1P05023 1023 aaKnown RBP15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 TMC4Q7Z404 712 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 IRF2BP1Q8IU81 584 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 KCNQ5Q9NR82 932 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 NPHP3-ACAD11A0A0J9YXS1 232 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 TRAF5O00463 557 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 VSNL1P62760 191 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 SPA17Q15506 151 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 MTA3Q9BTC8 594 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 LACRTQ9GZZ8 138 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 MYH15Q9Y2K3 1946 aa15.26■□□□□ 0.03
PRPF40B-209ENST00000548825 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 EPS15P42566 896 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 ZYXQ15942 572 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 TMEM266Q2M3C6 531 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 DNAJC21Q5F1R6 531 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 TRIM9Q9C026 710 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 MYO6Q9UM54 1294 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 SCAF8Q9UPN6 1271 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 PCP11498 1178 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 HSP90B2PQ58FF3 399 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 P2RX5Q93086 422 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 RTFDC1Q9BY42 306 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 TMX4Q9H1E5 349 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 EHD2Q9NZN4 543 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 USP17L10C9JJH3 530 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 GDF11O95390 407 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 STAT3P40763 770 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 KCNJ6P48051 423 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 ADCY7P51828 1080 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 CYP4A11Q02928 519 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 SBK1Q52WX2 424 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 KRT25Q7Z3Z0 450 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 C4orf32Q8N8J7 132 aa15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.25■□□□□ 0.03
PRPF40B-209ENST00000548825 ANKRD65E5RJM6 399 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 TCERG1LQ5VWI1 586 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 ARL6IP4Q66PJ3 421 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 MLXIPQ9HAP2 919 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 LEMD3Q9Y2U8 911 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 PCNTO95613 3336 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 UBXN2AP68543 259 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 GABPB1Q06547 395 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 NFIAQ12857 509 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 CEP112Q8N8E3 955 aa15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 NHEJ1Q9H9Q4 299 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-209ENST00000548825 RIN2Q8WYP3 895 aaPredicted RBP15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 RABGGTAQ92696 567 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 MYMKA6NI61 221 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 LGALS16A8MUM7 142 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 C2orf54Q08AI8 447 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 KCNK18Q7Z418 384 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 NAA15Q9BXJ9 866 aaKnown RBP15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 DDX4Q9NQI0 724 aaKnown RBP15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 RCCD1A6NED2 376 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 E9PMD0 336 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 CHMP2AO43633 222 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 TUBB4AP04350 444 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 AMPD3Q01432 767 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 KIF5AQ12840 1032 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 PKD2L1Q9P0L9 805 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 DAGLAQ9Y4D2 1042 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 MYH6P13533 1939 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
PRPF40B-209ENST00000548825 PALM3A6NDB9 673 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 EPHB6O15197 1021 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 NCK2O43639 380 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 HERC4Q5GLZ8 1057 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 CCDC181Q5TID7 509 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 TBC1D16Q8TBP0 767 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 MMS19Q96T76 1030 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 PYM1Q9BRP8 204 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 KIAA1024Q9UPX6 916 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 ERLIN1O75477 346 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 MOCS3O95396 460 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 CYLC1P35663 651 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 PLS1Q14651 629 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 ZFPM1Q8IX07 1006 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 LARP4BQ92615 738 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 DDX12PQ92771 950 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms