RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 POTEFA5A3E0 1075 aa22.35■■□□□ 1.17
SDR39U1-203ENST00000544691 CCND3P30281 292 aaPredicted RBP22.35■■□□□ 1.17
SDR39U1-203ENST00000544691 NTRK3Q16288 839 aa22.35■■□□□ 1.17
SDR39U1-203ENST00000544691 PRAMEF19Q5SWL8 479 aa22.35■■□□□ 1.17
SDR39U1-203ENST00000544691 TRPV1Q8NER1 839 aa22.35■■□□□ 1.17
SDR39U1-203ENST00000544691 V9GY48 417 aaPredicted RBP22.35■■□□□ 1.17
SDR39U1-203ENST00000544691 CFBP00751 764 aa22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 CYBAP13498 195 aa22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 MAMDC4Q6UXC1 1216 aa22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 ZNF467Q7Z7K2 595 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 GPKOWQ92917 476 aaPredicted RBP eCLIP22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 PHKBQ93100 1093 aa22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 TBC1D32Q96NH3 1257 aa22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 HMX1Q9NP08 348 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 PAK6Q9NQU5 681 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 COL20A1Q9P218 1284 aa22.34■■□□□ 1.17
SDR39U1-203ENST00000544691 RBBP6Q7Z6E9 1792 aaKnown RBP22.33■■□□□ 1.17
SDR39U1-203ENST00000544691 SNAI1O95863 264 aaPredicted RBP22.33■■□□□ 1.17
SDR39U1-203ENST00000544691 ANKRD1Q15327 319 aa22.33■■□□□ 1.17
SDR39U1-203ENST00000544691 MCF2L2Q86YR7 1114 aa22.33■■□□□ 1.17
SDR39U1-203ENST00000544691 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.33■■□□□ 1.17
SDR39U1-203ENST00000544691 LARGE1O95461 756 aa22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 HOXA13P31271 388 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 TRAF1Q13077 416 aa22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 ARMCX2Q7L311 632 aa22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 HEATR3Q7Z4Q2 680 aa22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 SYTL5Q8TDW5 730 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 TMEM106CQ9BVX2 250 aa22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 MCM3APO60318 1980 aa22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 SYNGAP1Q96PV0 1343 aa22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 MKI67P46013 3256 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-203ENST00000544691 HSD17B4P51659 736 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 SCRN1Q12765 414 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 WWC2Q6AWC2 1192 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 MSL3Q8N5Y2 521 aaKnown RBP22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 DEFB118Q96PH6 123 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 GJB1P08034 283 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 IFNAR1P17181 557 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 ALDH5A1P51649 535 aaPredicted RBP22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 GHRHRQ02643 423 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 ME3Q16798 604 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 TYW1BQ6NUM6 668 aa22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 SLKQ9H2G2 1235 aaPredicted RBP22.31■■□□□ 1.16
SDR39U1-203ENST00000544691 PFKFB2O60825 505 aa22.3■■□□□ 1.16
SDR39U1-203ENST00000544691 DTNBO60941 627 aa22.3■■□□□ 1.16
SDR39U1-203ENST00000544691 CNGA1P29973 690 aa22.3■■□□□ 1.16
SDR39U1-203ENST00000544691 TAAR1Q96RJ0 339 aa22.3■■□□□ 1.16
SDR39U1-203ENST00000544691 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.3■■□□□ 1.16
SDR39U1-203ENST00000544691 ADD3Q9UEY8 706 aaKnown RBP22.3■■□□□ 1.16
SDR39U1-203ENST00000544691 CPLX1O14810 134 aa22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 ZNF865P0CJ78 1059 aaPredicted RBP22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 EN2P19622 333 aaPredicted RBP22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 PKN1Q16512 942 aa22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 NECAB1Q8N987 351 aa22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 U2AF1L4Q8WU68 220 aaKnown RBP22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 SLC26A6Q9BXS9 759 aa22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 MAF1Q9H063 256 aa22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 CNPY2Q9Y2B0 182 aa22.29■■□□□ 1.16
SDR39U1-203ENST00000544691 ASB14A6NK59 587 aa22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 PRPF3O43395 683 aaKnown RBP22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 RABEP1Q15276 862 aa22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 PFKFB3Q16875 520 aaPredicted RBP22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 DNERQ8NFT8 737 aa22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 SHISA4Q96DD7 197 aa22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 RNF26Q9BY78 433 aaPredicted RBP22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 KATNBL1Q9H079 304 aa22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 ZHX1Q9UKY1 873 aaPredicted RBP22.28■■□□□ 1.16
SDR39U1-203ENST00000544691 GCOM1H8Y6P7 765 aaPredicted RBP22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 STXBP3O00186 592 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 POLR2MP0CAP2 368 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 SCG2P13521 617 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 GJA8P48165 433 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 ANO1Q5XXA6 986 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 USP17L6PQ6QN14 398 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 EEPD1Q7L9B9 569 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 NRBP1Q9UHY1 535 aa22.27■■□□□ 1.16
SDR39U1-203ENST00000544691 MEIS2O14770 477 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 SGPL1O95470 568 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 NAPAP54920 295 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 ACVR2BQ13705 512 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 LHX8Q68G74 356 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 FCHSD1Q86WN1 690 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 FBXO16Q8IX29 292 aaPredicted RBP22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 MORC4Q8TE76 937 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 RMDN3Q96TC7 470 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 ABHD16BQ9H3Z7 469 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 BARHL2Q9NY43 387 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 MAP3K20Q9NYL2 800 aaKnown RBP22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 SEPT4O43236 478 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 EDNRBP24530 442 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 AKAP17AQ02040 695 aaKnown RBP22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 GTF3C6Q969F1 213 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 LENG1Q96BZ8 264 aaPredicted RBP22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 PSTPIP2Q9H939 334 aa22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 DDX20Q9UHI6 824 aaKnown RBP22.26■■□□□ 1.15
SDR39U1-203ENST00000544691 LRRC37A2A6NM11 1700 aa22.25■■□□□ 1.15
SDR39U1-203ENST00000544691 CTDNEP1O95476 244 aa22.25■■□□□ 1.15
SDR39U1-203ENST00000544691 EIF2AK2P19525 551 aaKnown RBP22.25■■□□□ 1.15
SDR39U1-203ENST00000544691 SSRP1Q08945 709 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms