RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TICAM2Q86XR7 235 aa26.88■■□□□ 1.89
PKP3-210ENST00000533249 ZNF576Q9H609 170 aa26.88■■□□□ 1.89
PKP3-210ENST00000533249 UMODL1Q5DID0 1318 aa26.88■■□□□ 1.89
PKP3-210ENST00000533249 CALML3P27482 149 aa26.87■■□□□ 1.89
PKP3-210ENST00000533249 PBX2P40425 430 aa26.87■■□□□ 1.89
PKP3-210ENST00000533249 RASIP1Q5U651 963 aa26.87■■□□□ 1.89
PKP3-210ENST00000533249 TBC1D10CQ8IV04 446 aa26.87■■□□□ 1.89
PKP3-210ENST00000533249 TRPV6Q9H1D0 765 aa26.87■■□□□ 1.89
PKP3-210ENST00000533249 IL23AQ9NPF7 189 aa26.87■■□□□ 1.89
PKP3-210ENST00000533249 ZNF543Q08ER8 600 aa26.86■■□□□ 1.89
PKP3-210ENST00000533249 DUSP28Q4G0W2 176 aa26.86■■□□□ 1.89
PKP3-210ENST00000533249 CLEC4DQ8WXI8 215 aa26.86■■□□□ 1.89
PKP3-210ENST00000533249 PBX4Q9BYU1 374 aa26.86■■□□□ 1.89
PKP3-210ENST00000533249 WDR11Q9BZH6 1224 aa26.86■■□□□ 1.89
PKP3-210ENST00000533249 B4GALT4O60513 344 aa26.85■■□□□ 1.89
PKP3-210ENST00000533249 CCL23P55773 120 aa26.85■■□□□ 1.89
PKP3-210ENST00000533249 RNF207Q6ZRF8 634 aa26.85■■□□□ 1.89
PKP3-210ENST00000533249 TTC14Q96N46 770 aa26.85■■□□□ 1.89
PKP3-210ENST00000533249 PCP11498 1178 aaKnown RBP26.84■■□□□ 1.89
PKP3-210ENST00000533249 ZKSCAN3Q9BRR0 538 aa26.84■■□□□ 1.89
PKP3-210ENST00000533249 NOC4LQ9BVI4 516 aaKnown RBP26.84■■□□□ 1.89
PKP3-210ENST00000533249 SEZ6LQ9BYH1 1024 aa26.84■■□□□ 1.89
PKP3-210ENST00000533249 RNF41Q9H4P4 317 aaPredicted RBP26.84■■□□□ 1.89
PKP3-210ENST00000533249 NEDD4P46934 1319 aa26.84■■□□□ 1.89
PKP3-210ENST00000533249 FGBP02675 491 aa26.83■■□□□ 1.89
PKP3-210ENST00000533249 SDSP20132 328 aa26.83■■□□□ 1.89
PKP3-210ENST00000533249 MFAP1P55081 439 aaKnown RBP26.83■■□□□ 1.89
PKP3-210ENST00000533249 ESR2Q92731 530 aa26.83■■□□□ 1.89
PKP3-210ENST00000533249 CXXC1Q9P0U4 656 aaPredicted RBP26.83■■□□□ 1.89
PKP3-210ENST00000533249 PNMA2Q9UL42 364 aa26.83■■□□□ 1.89
PKP3-210ENST00000533249 LOC102724159A0A0B4J2E5 919 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 MYL3P08590 195 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 GOLGA8HP0CJ92 632 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 SNHG28P0DPA3 235 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 RPS6P62753 249 aaKnown RBP26.82■■□□□ 1.88
PKP3-210ENST00000533249 PDE4DQ08499 809 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 PWP2Q15269 919 aaKnown RBP26.82■■□□□ 1.88
PKP3-210ENST00000533249 SMC5Q8IY18 1101 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 HERVK_113Q902F9 699 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 MTIF3Q9H2K0 278 aaKnown RBP26.82■■□□□ 1.88
PKP3-210ENST00000533249 RWDD1Q9H446 243 aaPredicted RBP26.82■■□□□ 1.88
PKP3-210ENST00000533249 POLR3EQ9NVU0 708 aa26.82■■□□□ 1.88
PKP3-210ENST00000533249 USH1GQ495M9 461 aa26.81■■□□□ 1.88
PKP3-210ENST00000533249 OTOP2Q7RTS6 562 aa26.81■■□□□ 1.88
PKP3-210ENST00000533249 OR6J1Q8NGC5 347 aa26.81■■□□□ 1.88
PKP3-210ENST00000533249 WNT8AQ9H1J5 351 aa26.81■■□□□ 1.88
PKP3-210ENST00000533249 ALDH8A1Q9H2A2 487 aaPredicted RBP26.81■■□□□ 1.88
PKP3-210ENST00000533249 CPVLQ9H3G5 476 aa26.81■■□□□ 1.88
PKP3-210ENST00000533249 WDR19Q8NEZ3 1342 aa26.81■■□□□ 1.88
PKP3-210ENST00000533249 PRUNE2Q8WUY3 3088 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 RBM47A0AV96 593 aaKnown RBP26.8■■□□□ 1.88
PKP3-210ENST00000533249 ZNF213O14771 459 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 CPT1AP50416 773 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 CHD1LQ86WJ1 897 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 PLEKHM2Q8IWE5 1019 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 USP38Q8NB14 1042 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 UBA5Q9GZZ9 404 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 MSRAQ9UJ68 235 aa26.8■■□□□ 1.88
PKP3-210ENST00000533249 PURAQ00577 322 aaKnown RBP26.79■■□□□ 1.88
PKP3-210ENST00000533249 PPP2R5BQ15173 497 aa26.79■■□□□ 1.88
PKP3-210ENST00000533249 GPATCH4Q5T3I0 446 aaKnown RBP26.79■■□□□ 1.88
PKP3-210ENST00000533249 CWC27Q6UX04 472 aaKnown RBP26.79■■□□□ 1.88
PKP3-210ENST00000533249 SCLYQ96I15 445 aa26.79■■□□□ 1.88
PKP3-210ENST00000533249 GAS2L1Q99501 681 aaPredicted RBP26.79■■□□□ 1.88
PKP3-210ENST00000533249 MPHOSPH6Q99547 160 aaKnown RBP26.79■■□□□ 1.88
PKP3-210ENST00000533249 PRDM12Q9H4Q4 367 aa26.79■■□□□ 1.88
PKP3-210ENST00000533249 GPHNQ9NQX3 736 aaPredicted RBP26.79■■□□□ 1.88
PKP3-210ENST00000533249 TRMT13Q9NUP7 481 aaKnown RBP26.79■■□□□ 1.88
PKP3-210ENST00000533249 CYP2C9P11712 490 aa26.78■■□□□ 1.88
PKP3-210ENST00000533249 AAMPQ13685 434 aa26.78■■□□□ 1.88
PKP3-210ENST00000533249 RAB30Q15771 203 aa26.78■■□□□ 1.88
PKP3-210ENST00000533249 DGKHQ86XP1 1220 aa26.78■■□□□ 1.88
PKP3-210ENST00000533249 DIAPH3Q9NSV4 1193 aa26.78■■□□□ 1.88
PKP3-210ENST00000533249 MYO9BQ13459 2157 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 LAMA4Q16363 1823 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 TNKSO95271 1327 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 KDM4AO75164 1064 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 EDNRBP24530 442 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 FAM47CQ5HY64 1035 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 PNMA1Q8ND90 353 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 DNERQ8NFT8 737 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 SCFD2Q8WU76 684 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 COPS5Q92905 334 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 MTG1Q9BT17 334 aaPredicted RBP26.77■■□□□ 1.88
PKP3-210ENST00000533249 NKX2-4Q9H2Z4 354 aa26.77■■□□□ 1.88
PKP3-210ENST00000533249 GBF1Q92538 1859 aa26.76■■□□□ 1.88
PKP3-210ENST00000533249 RAD50Q92878 1312 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 IGHDP01880 384 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 SUPT20HL2P0C7V6 817 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 NUCB1Q02818 461 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 BRDTQ58F21 947 aaPredicted RBP26.76■■□□□ 1.87
PKP3-210ENST00000533249 IQCA1Q86XH1 822 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 RPUSD2Q8IZ73 545 aaKnown RBP26.76■■□□□ 1.87
PKP3-210ENST00000533249 PPP1R13LQ8WUF5 828 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 PPM1EQ8WY54 764 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 OSBPL3Q9H4L5 887 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 KAT14Q9H8E8 782 aa26.76■■□□□ 1.87
PKP3-210ENST00000533249 SUPT16HQ9Y5B9 1047 aaKnown RBP26.76■■□□□ 1.87
PKP3-210ENST00000533249 B4E1Z4 1266 aa26.75■■□□□ 1.87
PKP3-210ENST00000533249 NKRFO15226 690 aaKnown RBP eCLIP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms