RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 TTLL1O95922 423 aa19.4■□□□□ 0.7
CHMP4A-203ENST00000527154 STAT2P52630 851 aa19.4■□□□□ 0.7
CHMP4A-203ENST00000527154 PTPN11Q06124 597 aaPredicted RBP19.4■□□□□ 0.7
CHMP4A-203ENST00000527154 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.4■□□□□ 0.7
CHMP4A-203ENST00000527154 GMCL1Q96IK5 515 aa19.4■□□□□ 0.7
CHMP4A-203ENST00000527154 MYH7P12883 1935 aa19.39■□□□□ 0.7
CHMP4A-203ENST00000527154 POTEB3A0JP26 581 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 LCHNA4D1U4 455 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 IFIT2P09913 472 aaKnown RBP19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 NHLH1Q02575 133 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 POTEBQ6S5H4 581 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 FAM160B2Q86V87 743 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 SNX27Q96L92 541 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 TRERF1Q96PN7 1200 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 MTG1Q9BT17 334 aaPredicted RBP19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.69
CHMP4A-203ENST00000527154 ERVK-21P61565 698 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 RBL2Q08999 1139 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 LRRFIP1Q32MZ4 808 aaKnown RBP19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 ZNF318Q5VUA4 2279 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 SLFN13Q68D06 897 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 KIAA1211Q6ZU35 1233 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 EEPD1Q7L9B9 569 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 FTSJ3Q8IY81 847 aaKnown RBP19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 LRRC47Q8N1G4 583 aaKnown RBP19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 STAG1Q8WVM7 1258 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 CTAGE1Q96RT6 745 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 SUGCTQ9HAC7 445 aa19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 EPB41L4AQ9HCS5 686 aaPredicted RBP19.38■□□□□ 0.69
CHMP4A-203ENST00000527154 TMEM232C9JQI7 657 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 ALADP13716 330 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 CPT1AP50416 773 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 WDR5P61964 334 aaKnown RBP19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 NBPF20Q3BBV1 942 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 MUM1L1Q5H9M0 696 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 NEDD1Q8NHV4 660 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 GDPD5Q8WTR4 605 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 CHURC1Q8WUH1 139 aa19.37■□□□□ 0.69
CHMP4A-203ENST00000527154 A6NJR5 290 aa19.36■□□□□ 0.69
CHMP4A-203ENST00000527154 CXCL10P02778 98 aa19.36■□□□□ 0.69
CHMP4A-203ENST00000527154 ZSCAN25Q6NSZ9 544 aa19.36■□□□□ 0.69
CHMP4A-203ENST00000527154 SIRT2Q8IXJ6 389 aa19.36■□□□□ 0.69
CHMP4A-203ENST00000527154 PURBQ96QR8 312 aaKnown RBP19.36■□□□□ 0.69
CHMP4A-203ENST00000527154 WDR11Q9BZH6 1224 aa19.36■□□□□ 0.69
CHMP4A-203ENST00000527154 RAB11FIP3O75154 756 aa19.35■□□□□ 0.69
CHMP4A-203ENST00000527154 GJB5O95377 273 aa19.35■□□□□ 0.69
CHMP4A-203ENST00000527154 BFSP2Q13515 415 aa19.35■□□□□ 0.69
CHMP4A-203ENST00000527154 COL19A1Q14993 1142 aa19.35■□□□□ 0.69
CHMP4A-203ENST00000527154 NEK9Q8TD19 979 aa19.35■□□□□ 0.69
CHMP4A-203ENST00000527154 GRXCR2A6NFK2 248 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 KPNA6O60684 536 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 ALAS1P13196 640 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 IL9P15248 144 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 EDNRBP24530 442 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 SESTD1Q86VW0 696 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 RETREG2Q8NC44 543 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 CAGE1Q8TC20 777 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 OSBP2Q969R2 916 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 FBXL18Q96ME1 805 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 ZNF287Q9HBT7 754 aa19.34■□□□□ 0.69
CHMP4A-203ENST00000527154 LINC01553A4QN01 128 aa19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 NKRFO15226 690 aaKnown RBP eCLIP19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 NOVP48745 357 aa19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 ALDH5A1P51649 535 aaPredicted RBP19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 DEFB103AP81534 67 aa19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 ZNF444Q8N0Y2 327 aaPredicted RBP19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 AFAP1L1Q8TED9 768 aa19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 TGS1Q96RS0 853 aaKnown RBP19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 RAD9AQ99638 391 aa19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 FTOQ9C0B1 505 aaKnown RBP eCLIP19.33■□□□□ 0.681e-12■■■■□ 25.8
CHMP4A-203ENST00000527154 PRR12Q9ULL5 1215 aa19.33■□□□□ 0.68
CHMP4A-203ENST00000527154 USP34Q70CQ2 3546 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 PRDM1O75626 825 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 PARNO95453 639 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 ICAM1P05362 532 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 MYL3P08590 195 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 SLC1A4P43007 532 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 KCNJ6P48051 423 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 MKRN4PQ13434 485 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 PUS10Q3MIT2 529 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 ADD3Q9UEY8 706 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 SIP14410 1827 aa19.32■□□□□ 0.68
CHMP4A-203ENST00000527154 C19orf67A6NJJ6 358 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 DCXO43602 365 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 KCNA5P22460 613 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 TCTN1Q2MV58 587 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 PTCRAQ6ISU1 281 aaPredicted RBP19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 RCSD1Q6JBY9 416 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 CNKSR3Q6P9H4 555 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 OR6J1Q8NGC5 347 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 DHX38Q92620 1227 aaKnown RBP19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 RANBP17Q9H2T7 1088 aaKnown RBP19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 TRIOO75962 3097 aa19.31■□□□□ 0.68
CHMP4A-203ENST00000527154 ABHD14A-ACY1A0A1B0GW23 586 aa19.3■□□□□ 0.68
CHMP4A-203ENST00000527154 BAATQ14032 418 aaPredicted RBP19.3■□□□□ 0.68
CHMP4A-203ENST00000527154 TMCO2Q7Z6W1 182 aaPredicted RBP19.3■□□□□ 0.68
CHMP4A-203ENST00000527154 APPBP2Q92624 585 aa19.3■□□□□ 0.68
CHMP4A-203ENST00000527154 GPHNQ9NQX3 736 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms