RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CCDC17Q96LX7 622 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 POP1Q99575 1024 aaKnown RBP13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 MTG1Q9BT17 334 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 MBTPS2O43462 519 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 NDUFB10O96000 172 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 DLX2Q07687 328 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 GPM6BQ13491 265 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 GPNMBQ14956 572 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 SMAD2Q15796 467 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 CNKSR3Q6P9H4 555 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 PURBQ96QR8 312 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 NSUN3Q9H649 340 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 GPR108Q9NPR9 543 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 A1CFQ9NQ94 594 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 TRIOO75962 3097 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 PLXNA3P51805 1871 aa13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 TRIP12Q14669 1992 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-234ENST00000522227 KMT2EQ8IZD2 1858 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 F5H6K3 240 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 ATP2A1O14983 1001 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 AVPR2P30518 371 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 LTBRP36941 435 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 ZXDAP98168 799 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 KLRC3Q07444 240 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 PTGISQ16647 500 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 EPC2Q52LR7 807 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 SLC9C2Q5TAH2 1124 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.28□□□□□ -0.287e-6■■■□□ 15.2
CTNNA1-234ENST00000522227 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 ACAD9Q9H845 621 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 RNF146Q9NTX7 359 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 Q9Y3F1 56 aa13.28□□□□□ -0.28
CTNNA1-234ENST00000522227 C5orf42Q9H799 3197 aa13.27□□□□□ -0.28
CTNNA1-234ENST00000522227 MED19A0JLT2 244 aaPredicted RBP13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 PRR23AA6NEV1 266 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 USP17L12C9JPN9 530 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 USP17L21D6R901 530 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 NBNO60934 754 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 IGSF3O75054 1194 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 ALAS1P13196 640 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 PDE6AP16499 860 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 PKN1Q16512 942 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 ALDH1L2Q3SY69 923 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 SLFNL1Q499Z3 407 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 FAM9BQ8IZU0 186 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 CCDC155Q8N6L0 562 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 WDR11Q9BZH6 1224 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 ZNF532Q9HCE3 1301 aa13.27□□□□□ -0.29
CTNNA1-234ENST00000522227 ABHD14A-ACY1A0A1B0GW23 586 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 GNAI2P04899 355 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 SELPP16109 830 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 GTF2F1P35269 517 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 CPT1AP50416 773 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 SNAP25P60880 206 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 MYO7AQ13402 2215 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 IKBKEQ14164 716 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 DUSP28Q4G0W2 176 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 IRF2BPLQ9H1B7 796 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
CTNNA1-234ENST00000522227 CACNA1BQ00975 2339 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 BAZ2AQ9UIF9 1905 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 H3BNC9 293 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 LINC01565O15544 149 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 SURF6O75683 361 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 C12orf60Q5U649 245 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 GDF6Q6KF10 455 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 NSMFQ6X4W1 530 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 C16orf86Q6ZW13 317 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 AFAP1L1Q8TED9 768 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 DHX38Q92620 1227 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 COPS5Q92905 334 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 VTA1Q9NP79 307 aa13.25□□□□□ -0.29
CTNNA1-234ENST00000522227 CACNA1GO43497 2377 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 BCAR3O75815 825 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 UPP2O95045 317 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 MBD4O95243 580 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 HYAL1Q12794 435 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 SMAD4Q13485 552 aaKnown RBP13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 BRDTQ58F21 947 aaPredicted RBP13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms