RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 LCTP09848 1927 aa28.04■■■□□ 2.08
SRPK1-210ENST00000508473 MYADML2A6NDP7 307 aa28.03■■■□□ 2.08
SRPK1-210ENST00000508473 TNFAIP2Q03169 654 aa28.03■■■□□ 2.08
SRPK1-210ENST00000508473 TSGA10IPQ3SY00 556 aa28.03■■■□□ 2.08
SRPK1-210ENST00000508473 MCF2L2Q86YR7 1114 aa28.03■■■□□ 2.08
SRPK1-210ENST00000508473 MORC4Q8TE76 937 aa28.03■■■□□ 2.08
SRPK1-210ENST00000508473 PHF24Q9UPV7 400 aa28.03■■■□□ 2.08
SRPK1-210ENST00000508473 SYN1P17600 705 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 PTGS1P23219 599 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 LIFRP42702 1097 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 TAPT1Q6NXT6 567 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 CHRDL2Q6WN34 429 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 SYTL5Q8TDW5 730 aaPredicted RBP28.02■■■□□ 2.08
SRPK1-210ENST00000508473 PCDH10Q9P2E7 1040 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 COLQQ9Y215 455 aaPredicted RBP28.02■■■□□ 2.08
SRPK1-210ENST00000508473 PCDHA1Q9Y5I3 950 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 SLC12A7Q9Y666 1083 aa28.02■■■□□ 2.08
SRPK1-210ENST00000508473 C6orf222P0C671 652 aaPredicted RBP28.01■■■□□ 2.07
SRPK1-210ENST00000508473 KIF5BP33176 963 aa28.01■■■□□ 2.07
SRPK1-210ENST00000508473 KRT32Q14532 448 aa28.01■■■□□ 2.07
SRPK1-210ENST00000508473 SLC39A5Q6ZMH5 540 aa28.01■■■□□ 2.07
SRPK1-210ENST00000508473 DHX32Q7L7V1 743 aaKnown RBP28.01■■■□□ 2.07
SRPK1-210ENST00000508473 TAAR1Q96RJ0 339 aa28.01■■■□□ 2.07
SRPK1-210ENST00000508473 MAP3K14Q99558 947 aa28.01■■■□□ 2.07
SRPK1-210ENST00000508473 VTA1Q9NP79 307 aa28.01■■■□□ 2.07
SRPK1-210ENST00000508473 COL20A1Q9P218 1284 aa28.01■■■□□ 2.07
SRPK1-210ENST00000508473 REC8O95072 547 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 CFBP00751 764 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 SMPD1P17405 629 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 RTP1P59025 263 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 EXOSC10Q01780 885 aaKnown RBP28■■■□□ 2.07
SRPK1-210ENST00000508473 PDE4DQ08499 809 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 TMEM63BQ5T3F8 832 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 KLHDC9Q8NEP7 349 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 DNERQ8NFT8 737 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 SPC25Q9HBM1 224 aa28■■■□□ 2.07
SRPK1-210ENST00000508473 BAZ2BQ9UIF8 2168 aaKnown RBP27.99■■■□□ 2.07
SRPK1-210ENST00000508473 PNMA6FA0A0J9YX94 578 aa27.99■■■□□ 2.07
SRPK1-210ENST00000508473 OPLAHO14841 1288 aa27.99■■■□□ 2.07
SRPK1-210ENST00000508473 PLEKHA8P1O95397 391 aa27.99■■■□□ 2.07
SRPK1-210ENST00000508473 HSPA4P34932 840 aa27.99■■■□□ 2.07
SRPK1-210ENST00000508473 KCNA10Q16322 511 aa27.99■■■□□ 2.07
SRPK1-210ENST00000508473 CMTR1Q8N1G2 835 aaKnown RBP27.99■■■□□ 2.07
SRPK1-210ENST00000508473 UPF3AQ9H1J1 476 aaKnown RBP27.99■■■□□ 2.07
SRPK1-210ENST00000508473 ATP11BQ9Y2G3 1177 aa27.99■■■□□ 2.07
SRPK1-210ENST00000508473 LOC102724159A0A0B4J2E5 919 aa27.98■■■□□ 2.07
SRPK1-210ENST00000508473 CPA1P15085 419 aa27.98■■■□□ 2.07
SRPK1-210ENST00000508473 GJA9P57773 515 aa27.98■■■□□ 2.07
SRPK1-210ENST00000508473 PWP2Q15269 919 aaKnown RBP27.98■■■□□ 2.07
SRPK1-210ENST00000508473 IQSEC1Q6DN90 963 aa27.98■■■□□ 2.07
SRPK1-210ENST00000508473 MICU3Q86XE3 530 aa27.98■■■□□ 2.07
SRPK1-210ENST00000508473 KCNB2Q92953 911 aa27.98■■■□□ 2.07
SRPK1-210ENST00000508473 MPHOSPH6Q99547 160 aaKnown RBP27.98■■■□□ 2.07
SRPK1-210ENST00000508473 TSEN34Q9BSV6 310 aaKnown RBP27.98■■■□□ 2.07
SRPK1-210ENST00000508473 GNEQ9Y223 722 aaKnown RBP27.98■■■□□ 2.07
SRPK1-210ENST00000508473 SNX14Q9Y5W7 946 aa27.98■■■□□ 2.07
SRPK1-210ENST00000508473 MYH6P13533 1939 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 A0A1W2PQ45 241 aaPredicted RBP27.97■■■□□ 2.07
SRPK1-210ENST00000508473 A0A1W2PQY0 241 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 CALM1P0DP23 149 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 CALM2P0DP24 149 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 CALM3P0DP25 149 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 EDNRBP24530 442 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 ACLYP53396 1101 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 BEX3Q00994 111 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 TRIM60Q495X7 471 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 CCSAPQ6IQ19 270 aaPredicted RBP27.97■■■□□ 2.07
SRPK1-210ENST00000508473 TLK2Q86UE8 772 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 SGMS1Q86VZ5 419 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 SRBD1Q8N5C6 995 aaKnown RBP27.97■■■□□ 2.07
SRPK1-210ENST00000508473 JAKMIP1Q96N16 626 aaKnown RBP27.97■■■□□ 2.07
SRPK1-210ENST00000508473 SPZ1Q9BXG8 430 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 MAF1Q9H063 256 aa27.97■■■□□ 2.07
SRPK1-210ENST00000508473 LRRC37A2A6NM11 1700 aa27.96■■■□□ 2.07
SRPK1-210ENST00000508473 DYNC1LI2O43237 492 aaPredicted RBP27.96■■■□□ 2.07
SRPK1-210ENST00000508473 GNAQP50148 359 aa27.96■■■□□ 2.07
SRPK1-210ENST00000508473 GNASQ5JWF2 1037 aa27.96■■■□□ 2.07
SRPK1-210ENST00000508473 SYNE3Q6ZMZ3 975 aa27.96■■■□□ 2.07
SRPK1-210ENST00000508473 RRP36Q96EU6 259 aaKnown RBP27.96■■■□□ 2.07
SRPK1-210ENST00000508473 RMDN3Q96TC7 470 aa27.96■■■□□ 2.07
SRPK1-210ENST00000508473 LZTS2Q9BRK4 669 aa27.96■■■□□ 2.07
SRPK1-210ENST00000508473 AP5M1Q9H0R1 490 aa27.96■■■□□ 2.07
SRPK1-210ENST00000508473 B4DLN1 442 aa27.95■■■□□ 2.06
SRPK1-210ENST00000508473 CTAGE5O15320 804 aa27.95■■■□□ 2.06
SRPK1-210ENST00000508473 CST5P28325 142 aaPredicted RBP27.95■■■□□ 2.06
SRPK1-210ENST00000508473 HOXA13P31271 388 aaPredicted RBP27.95■■■□□ 2.06
SRPK1-210ENST00000508473 MRPL12P52815 198 aaKnown RBP27.95■■■□□ 2.06
SRPK1-210ENST00000508473 TRAF1Q13077 416 aa27.95■■■□□ 2.06
SRPK1-210ENST00000508473 HABP4Q5JVS0 413 aaKnown RBP27.95■■■□□ 2.06
SRPK1-210ENST00000508473 FANCBQ8NB91 859 aa27.95■■■□□ 2.06
SRPK1-210ENST00000508473 NSUN6Q8TEA1 469 aaKnown RBP27.95■■■□□ 2.06
SRPK1-210ENST00000508473 WDR11Q9BZH6 1224 aa27.95■■■□□ 2.06
SRPK1-210ENST00000508473 BRPF3Q9ULD4 1205 aa27.95■■■□□ 2.06
SRPK1-210ENST00000508473 MOXD2PA6NHM9 499 aa27.94■■■□□ 2.06
SRPK1-210ENST00000508473 ASGR1P07306 291 aa27.94■■■□□ 2.06
SRPK1-210ENST00000508473 HMGB1P09429 215 aaKnown RBP27.94■■■□□ 2.06
SRPK1-210ENST00000508473 EIF2AK2P19525 551 aaKnown RBP27.94■■■□□ 2.06
SRPK1-210ENST00000508473 HSD17B4P51659 736 aa27.94■■■□□ 2.06
SRPK1-210ENST00000508473 SNX17Q15036 470 aa27.94■■■□□ 2.06
SRPK1-210ENST00000508473 ARHGEF16Q5VV41 709 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms