RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
SCLT1-208ENST00000506368 CD248Q9HCU0 757 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 BICDL2A1A5D9 508 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 PRPF3O43395 683 aaKnown RBP17.63■□□□□ 0.41
SCLT1-208ENST00000506368 GHRP10912 638 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 LONP1P36776 959 aaKnown RBP17.63■□□□□ 0.41
SCLT1-208ENST00000506368 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 LACTB2Q53H82 288 aaPredicted RBP17.63■□□□□ 0.41
SCLT1-208ENST00000506368 ARHGAP27Q6ZUM4 889 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 IFNL3Q8IZI9 196 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
SCLT1-208ENST00000506368 MACROD2A1Z1Q3 448 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 CASP1P29466 404 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 MCAMP43121 646 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 IRX1P78414 480 aaPredicted RBP17.62■□□□□ 0.41
SCLT1-208ENST00000506368 CCDC96Q2M329 555 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 ZNF654Q8IZM8 581 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 NACAP1Q9BZK3 213 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 VPS54Q9P1Q0 977 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 ZNF532Q9HCE3 1301 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 MYH2Q9UKX2 1941 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 RCCD1A6NED2 376 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 UBE2Q2LH0YL09 131 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
SCLT1-208ENST00000506368 ITGB3BPQ13352 177 aaPredicted RBP17.62■□□□□ 0.41
SCLT1-208ENST00000506368 BIRC3Q13489 604 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 SLMAPQ14BN4 828 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 CYB5D1Q6P9G0 228 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 HDAC7Q8WUI4 952 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 CCDC43Q96MW1 224 aaKnown RBP17.62■□□□□ 0.41
SCLT1-208ENST00000506368 IFIH1Q9BYX4 1025 aaKnown RBP17.62■□□□□ 0.41
SCLT1-208ENST00000506368 BATF3Q9NR55 127 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 PLAGL2Q9UPG8 496 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
SCLT1-208ENST00000506368 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 ZNF233A6NK53 670 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 PDE6AP16499 860 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 ATP1A2P50993 1020 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 HSP90AB3PQ58FF7 597 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 ZSCAN29Q8IWY8 852 aaPredicted RBP17.61■□□□□ 0.41
SCLT1-208ENST00000506368 FUKQ8N0W3 1084 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 PROM2Q8N271 834 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 MAGEF1Q9HAY2 307 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 PCDHA13Q9Y5I0 950 aa17.61■□□□□ 0.41
SCLT1-208ENST00000506368 TCRBV5S4A2TA0A5A2 114 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 C5orf60A6NFR6 353 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 HOXA7P31268 230 aaPredicted RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 IFT88Q13099 833 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 XRCC4Q13426 336 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 EZH2Q15910 746 aaKnown RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 FKBP15Q5T1M5 1219 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 LRCH2Q5VUJ6 765 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 TTC19Q6DKK2 380 aaPredicted RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 RUFY4Q6ZNE9 571 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 CCDC47Q96A33 483 aaKnown RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 CYFIP2Q96F07 1278 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 TRIM47Q96LD4 638 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 TUBGCP2Q9BSJ2 902 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 BLZF1Q9H2G9 400 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 TAOK2Q9UL54 1235 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 LY75O60449 1722 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 GMNCA6NCL1 334 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 KRT14P02533 472 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 PAEPP09466 180 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 CALM1P0DP23 149 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 CALM2P0DP24 149 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 CALM3P0DP25 149 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 ARID4AP29374 1257 aaPredicted RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 HSPA9P38646 679 aaKnown RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 GUCY1A3Q02108 690 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 TBC1D8BQ0IIM8 1120 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 TRIM28Q13263 835 aaKnown RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 NKX2-3Q8TAU0 364 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 TNFRSF25Q93038 417 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 RABEP2Q9H5N1 569 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 LUC7LQ9NQ29 371 aaKnown RBP17.6■□□□□ 0.41
SCLT1-208ENST00000506368 PLCB1Q9NQ66 1216 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 LRWD1Q9UFC0 647 aa17.6■□□□□ 0.41
SCLT1-208ENST00000506368 DNAJC8O75937 253 aaPredicted RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 RHOBTB3O94955 611 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 CSF1RP07333 972 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 PTGDRQ13258 359 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 ZKSCAN8Q15776 578 aaPredicted RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 RCSD1Q6JBY9 416 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 EDEM3Q9BZQ6 932 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 TMBIM4Q9HC24 238 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 LRRC4BQ9NT99 713 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 AGPAT5Q9NUQ2 364 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 ABCB11O95342 1321 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 E7EVH7 732 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 PES1O00541 588 aaKnown RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 HDLBPQ00341 1268 aaKnown RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 TMED8Q6PL24 325 aaPredicted RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 SH2D3CQ8N5H7 860 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 GIMAP8Q8ND71 665 aaPredicted RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 CCHCR1Q8TD31 782 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 LRRC45Q96CN5 670 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms