RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ENO4A6NNW6 628 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 LGALS16A8MUM7 142 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 GSG1L2A8MUP6 293 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 SLC1A4P43007 532 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 KIF11P52732 1056 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 EPHB4P54760 987 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 SPAG1Q07617 926 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 PDE4DQ08499 809 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 PTGISQ16647 500 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 IFIT1BQ5T764 474 aaKnown RBP8.44□□□□□ -1.06
NEDD9-208ENST00000504387 LRCH2Q5VUJ6 765 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 IQCEQ6IPM2 695 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 MTMR8Q96EF0 704 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 EPN3Q9H201 632 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 DPH5Q9H2P9 285 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 ARHGAP20Q9P2F6 1191 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 NOVA2Q9UNW9 492 aaKnown RBP8.44□□□□□ -1.06
NEDD9-208ENST00000504387 HYOU1Q9Y4L1 999 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 RASSF10A6NK89 507 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 IFNAR2P48551 515 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 MYO1EQ12965 1108 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 STK4Q13043 487 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 ZNF658Q5TYW1 1059 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-208ENST00000504387 TAX1BP1Q86VP1 789 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 SPATA5Q8NB90 893 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 CAPN11Q9UMQ6 739 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 PSMA7O14818 248 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 ADAMTS2O95450 1211 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 SLC5A1P13866 664 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 GYG1P46976 350 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 TUBB4BP68371 445 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 BIRC2Q13490 618 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 SNCBQ16143 134 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 CYB5D1Q6P9G0 228 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 TBC1D1Q86TI0 1168 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-208ENST00000504387 TTLL11Q8NHH1 800 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 PIGBQ92521 554 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 MIEF2Q96C03 454 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 CYFIP2Q96F07 1278 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 TPX2Q9ULW0 747 aaKnown RBP8.44□□□□□ -1.06
NEDD9-208ENST00000504387 PCDH11XQ9BZA7 1347 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 PCDH11YQ9BZA8 1340 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 TARSL2A2RTX5 802 aaKnown RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 LRRC53A6NM62 1247 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 TMCO5BA8MYB1 307 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 COPB2P35606 906 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 MDH1P40925 334 aaKnown RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 MMP14P50281 582 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 DYNLL1P63167 89 aaKnown RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 PKN1Q16512 942 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 INF2Q27J81 1249 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 MICALCLQ6ZW33 695 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 SGMS1Q86VZ5 419 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 PARP9Q8IXQ6 854 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 TEX11Q8IYF3 940 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 CASKIN2Q8WXE0 1202 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 OSBPL7Q9BZF2 842 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 TMEM60Q9H2L4 133 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 VAT1LQ9HCJ6 419 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 ZNF142P52746 1687 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 RGPD2P0DJD1 1756 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 H7C1D1 291 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 GTPBP6O43824 516 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 PALMO75781 387 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 CTNNA1P35221 906 aaKnown RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 GCKP35557 465 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 FLT3P36888 993 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 CTSWP56202 376 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 RASGRF1Q13972 1273 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 PDXDC2PQ6P474 469 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 SH3RF1Q7Z6J0 888 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 ZBTB38Q8NAP3 1195 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-208ENST00000504387 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 ALS2CR12Q96Q35 445 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 SELENOSQ9BQE4 189 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 FAM167BQ9BTA0 163 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 MLXIPLQ9NP71 852 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 BTG4Q9NY30 223 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 TMEM94Q12767 1356 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 FMN2Q9NZ56 1722 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 ITIH6Q6UXX5 1313 aa8.43□□□□□ -1.06
NEDD9-208ENST00000504387 KCNK3O14649 394 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 KIF4AO95239 1232 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 PDE8BO95263 885 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 EZRP15311 586 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 IGHMBP2P38935 993 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 LIFRP42702 1097 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 ADCY1Q08828 1119 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 PRPF4BQ13523 1007 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 FAM228AQ86W67 206 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 FBXL16Q8N461 479 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 TRIM58Q8NG06 486 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 STAMBPL1Q96FJ0 436 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 DNAJC7Q99615 494 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 PACSIN1Q9BY11 444 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 KRT23Q9C075 422 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 ZHX3Q9H4I2 956 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 STK38LQ9Y2H1 464 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms