RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 BAZ2BQ9UIF8 2168 aaKnown RBP15.67■□□□□ 0.1
COL1A1-208ENST00000494334 ASTN1O14525 1302 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 ZNFX1Q9P2E3 1918 aaKnown RBP15.66■□□□□ 0.1
COL1A1-208ENST00000494334 SNAI1O95863 264 aaPredicted RBP15.66■□□□□ 0.1
COL1A1-208ENST00000494334 GJB1P08034 283 aa15.66■□□□□ 0.1
COL1A1-208ENST00000494334 CYBAP13498 195 aa15.66■□□□□ 0.1
COL1A1-208ENST00000494334 ANKRD1Q15327 319 aa15.66■□□□□ 0.1
COL1A1-208ENST00000494334 NTRK3Q16288 839 aa15.66■□□□□ 0.1
COL1A1-208ENST00000494334 TRPV1Q8NER1 839 aa15.66■□□□□ 0.1
COL1A1-208ENST00000494334 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL1A1-208ENST00000494334 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
COL1A1-208ENST00000494334 NCOA5Q9HCD5 579 aaKnown RBP15.66■□□□□ 0.1
COL1A1-208ENST00000494334 SYNGAP1Q96PV0 1343 aa15.66■□□□□ 0.1
COL1A1-208ENST00000494334 CFBP00751 764 aa15.65■□□□□ 0.1
COL1A1-208ENST00000494334 GHRHRQ02643 423 aa15.65■□□□□ 0.1
COL1A1-208ENST00000494334 STK3Q13188 491 aa15.65■□□□□ 0.1
COL1A1-208ENST00000494334 ARMCX2Q7L311 632 aa15.65■□□□□ 0.1
COL1A1-208ENST00000494334 SYTL5Q8TDW5 730 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-208ENST00000494334 DEFB118Q96PH6 123 aa15.65■□□□□ 0.1
COL1A1-208ENST00000494334 COL20A1Q9P218 1284 aa15.65■□□□□ 0.1
COL1A1-208ENST00000494334 NRBP1Q9UHY1 535 aa15.65■□□□□ 0.1
COL1A1-208ENST00000494334 BRCA2P51587 3418 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 ASB14A6NK59 587 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 SGPL1O95470 568 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 ZNF865P0CJ78 1059 aaPredicted RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 EN2P19622 333 aaPredicted RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 GJA8P48165 433 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 ALDH5A1P51649 535 aaPredicted RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 HSD17B4P51659 736 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 IFFO2Q5TF58 517 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 SAMD3Q8N6K7 520 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 U2AF1L4Q8WU68 220 aaKnown RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 TAAR1Q96RJ0 339 aa15.64■□□□□ 0.09
COL1A1-208ENST00000494334 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 MAP3K20Q9NYL2 800 aaKnown RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 ADD3Q9UEY8 706 aaKnown RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
COL1A1-208ENST00000494334 PRPF3O43395 683 aaKnown RBP15.63■□□□□ 0.09
COL1A1-208ENST00000494334 PPFIA3O75145 1194 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 IFNAR1P17181 557 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 CNGA1P29973 690 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 SCRN1Q12765 414 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 LHX8Q68G74 356 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 WWC2Q6AWC2 1192 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 NOL8Q76FK4 1167 aaKnown RBP15.63■□□□□ 0.09
COL1A1-208ENST00000494334 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 DNERQ8NFT8 737 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 MORC4Q8TE76 937 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 GPKOWQ92917 476 aaPredicted RBP eCLIP15.63■□□□□ 0.09
COL1A1-208ENST00000494334 PHKBQ93100 1093 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
COL1A1-208ENST00000494334 ABHD16BQ9H3Z7 469 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 CNPY2Q9Y2B0 182 aa15.63■□□□□ 0.09
COL1A1-208ENST00000494334 LOC102724159A0A0B4J2E5 919 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 GCOM1H8Y6P7 765 aaPredicted RBP15.62■□□□□ 0.09
COL1A1-208ENST00000494334 SEPT4O43236 478 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 PFKFB2O60825 505 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 POLR2MP0CAP2 368 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 HOXA13P31271 388 aaPredicted RBP15.62■□□□□ 0.09
COL1A1-208ENST00000494334 ACVR2BQ13705 512 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 PWP2Q15269 919 aaKnown RBP15.62■□□□□ 0.09
COL1A1-208ENST00000494334 PKN1Q16512 942 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 ME3Q16798 604 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
COL1A1-208ENST00000494334 TYW1BQ6NUM6 668 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 RNF26Q9BY78 433 aaPredicted RBP15.62■□□□□ 0.09
COL1A1-208ENST00000494334 KATNBL1Q9H079 304 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 CRISPLD2Q9H0B8 497 aa15.62■□□□□ 0.09
COL1A1-208ENST00000494334 DDX20Q9UHI6 824 aaKnown RBP15.62■□□□□ 0.09
COL1A1-208ENST00000494334 PLXNA1Q9UIW2 1896 aa15.61■□□□□ 0.09
COL1A1-208ENST00000494334 MEIS2O14770 477 aa15.61■□□□□ 0.09
COL1A1-208ENST00000494334 CPLX1O14810 134 aa15.61■□□□□ 0.09
COL1A1-208ENST00000494334 LARGE1O95461 756 aa15.61■□□□□ 0.09
COL1A1-208ENST00000494334 EDNRBP24530 442 aa15.61■□□□□ 0.09
COL1A1-208ENST00000494334 NSUN6Q8TEA1 469 aaKnown RBP15.61■□□□□ 0.09
COL1A1-208ENST00000494334 RMDN3Q96TC7 470 aa15.61■□□□□ 0.09
COL1A1-208ENST00000494334 SLC26A6Q9BXS9 759 aa15.61■□□□□ 0.09
COL1A1-208ENST00000494334 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
COL1A1-208ENST00000494334 ZHX1Q9UKY1 873 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-208ENST00000494334 KIAA0100Q14667 2235 aaKnown RBP15.6■□□□□ 0.09
COL1A1-208ENST00000494334 hCG_1984214I3L0E3 225 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 STXBP3O00186 592 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 MSCO60682 206 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 TFRCP02786 760 aaKnown RBP15.6■□□□□ 0.09
COL1A1-208ENST00000494334 SCG2P13521 617 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 AKAP17AQ02040 695 aaKnown RBP15.6■□□□□ 0.09
COL1A1-208ENST00000494334 RABEP1Q15276 862 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 ANO1Q5XXA6 986 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 CPLX2Q6PUV4 134 aaKnown RBP15.6■□□□□ 0.09
COL1A1-208ENST00000494334 USP17L6PQ6QN14 398 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 EEPD1Q7L9B9 569 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 FCHSD1Q86WN1 690 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 ZNF713Q8N859 430 aaPredicted RBP15.6■□□□□ 0.09
COL1A1-208ENST00000494334 PSTPIP2Q9H939 334 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 BARHL2Q9NY43 387 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 OGDHLQ9ULD0 1010 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 MYH6P13533 1939 aa15.6■□□□□ 0.09
COL1A1-208ENST00000494334 LCTP09848 1927 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 834.4 ms