RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 MAPK4P31152 587 aa14.29□□□□□ -0.12
SNX17-208ENST00000493711 SNAP25P60880 206 aa14.29□□□□□ -0.12
SNX17-208ENST00000493711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNX17-208ENST00000493711 CUL5Q93034 780 aa14.29□□□□□ -0.12
SNX17-208ENST00000493711 AGBL1Q96MI9 1066 aa14.29□□□□□ -0.12
SNX17-208ENST00000493711 ZMYND12Q9H0C1 365 aa14.29□□□□□ -0.12
SNX17-208ENST00000493711 H3BQV1 296 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 STRNO43815 780 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 PPFIA3O75145 1194 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 CNMDO75829 334 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 BCRP11274 1271 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 ALAS1P13196 640 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 ADCY7P51828 1080 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 NLRP5P59047 1200 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 CRHR2Q13324 411 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 USH1GQ495M9 461 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 NOM1Q5C9Z4 860 aaKnown RBP14.28□□□□□ -0.12
SNX17-208ENST00000493711 C17orf99Q6UX52 265 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 DAGLBQ8NCG7 672 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 FBXO18Q8NFZ0 1043 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 GPKOWQ92917 476 aaPredicted RBP eCLIP14.28□□□□□ -0.12
SNX17-208ENST00000493711 COA7Q96BR5 231 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 MOV10L1Q9BXT6 1211 aaKnown RBP14.28□□□□□ -0.12
SNX17-208ENST00000493711 ACAD9Q9H845 621 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 PSTPIP2Q9H939 334 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 RIC8AQ9NPQ8 531 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 RNF146Q9NTX7 359 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 RNF186Q9NXI6 227 aa14.28□□□□□ -0.12
SNX17-208ENST00000493711 PFASO15067 1338 aa14.27□□□□□ -0.12
SNX17-208ENST00000493711 SMCO2A6NFE2 343 aa14.27□□□□□ -0.13
SNX17-208ENST00000493711 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.13
SNX17-208ENST00000493711 NCAPG2Q86XI2 1143 aa14.27□□□□□ -0.13
SNX17-208ENST00000493711 ABRAQ8N0Z2 381 aa14.27□□□□□ -0.13
SNX17-208ENST00000493711 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.13
SNX17-208ENST00000493711 TXNRD2Q9NNW7 524 aa14.27□□□□□ -0.13
SNX17-208ENST00000493711 VPS54Q9P1Q0 977 aa14.27□□□□□ -0.13
SNX17-208ENST00000493711 TNRC18O15417 2968 aaPredicted RBP14.27□□□□□ -0.13
SNX17-208ENST00000493711 GCOM1H8Y6P7 765 aaPredicted RBP14.26□□□□□ -0.13
SNX17-208ENST00000493711 PIK3CDO00329 1044 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 FOSP01100 380 aaPredicted RBP14.26□□□□□ -0.13
SNX17-208ENST00000493711 POLR2MP0CAP2 368 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 SLC4A3P48751 1232 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 GHRHRQ02643 423 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 KCTD2Q14681 263 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 KIF22Q14807 665 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 ARHGEF6Q15052 776 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 KRT40Q6A162 431 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 SPRYD3Q8NCJ5 442 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 CPA4Q9UI42 421 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 PCDHA4Q9UN74 947 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 IVNS1ABPQ9Y6Y0 642 aa14.26□□□□□ -0.13
SNX17-208ENST00000493711 STX6O43752 255 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 TRPA1O75762 1119 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 MMP1P03956 469 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 FCER1AP12319 257 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 ERCC3P19447 782 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 SYT1P21579 422 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 KRT2P35908 639 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 NUCB2P80303 420 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 GNL2Q13823 731 aaKnown RBP14.25□□□□□ -0.13
SNX17-208ENST00000493711 Q3C1V9 767 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 BLIDQ8IZY5 108 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 REXO1Q8N1G1 1221 aaKnown RBP14.25□□□□□ -0.13
SNX17-208ENST00000493711 CLEC4DQ8WXI8 215 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 AIFM3Q96NN9 605 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
SNX17-208ENST00000493711 EHMT1Q9H9B1 1298 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 HOMER2Q9NSB8 354 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 THSD7BQ9C0I4 1608 aa14.25□□□□□ -0.13
SNX17-208ENST00000493711 PTPRFP10586 1907 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 HSD17B4P51659 736 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 AP3B2Q13367 1082 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 RNF207Q6ZRF8 634 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 KRT25Q7Z3Z0 450 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 PLEKHH3Q7Z736 793 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 ANKRD35Q8N283 1001 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 SLC5A4Q9NY91 659 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 RIPK3Q9Y572 518 aa14.24□□□□□ -0.13
SNX17-208ENST00000493711 VPS37CA5D8V6 355 aaPredicted RBP14.23□□□□□ -0.13
SNX17-208ENST00000493711 SLC15A5A6NIM6 579 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 SPDYE3A6NKU9 549 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 B4DLN1 442 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 TBC1D8O95759 1140 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 CFBP00751 764 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 GNRH1P01148 92 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 FCGRTP55899 365 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 SP3Q02447 781 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 MUM1L1Q5H9M0 696 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 WDR78Q5VTH9 848 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 NSMFQ6X4W1 530 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 DIS3L2Q8IYB7 885 aaKnown RBP14.23□□□□□ -0.13
SNX17-208ENST00000493711 MMP19Q99542 508 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
SNX17-208ENST00000493711 MCOLN1Q9GZU1 580 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 ZSCAN16Q9H4T2 348 aaPredicted RBP14.23□□□□□ -0.13
SNX17-208ENST00000493711 KCNJ14Q9UNX9 436 aa14.23□□□□□ -0.13
SNX17-208ENST00000493711 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms