RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 C7orf61Q8IZ16 206 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 TSPYL6Q8N831 410 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SPATA5Q8NB90 893 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 REPS2Q8NFH8 660 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SSH3Q8TE77 659 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SCG3Q8WXD2 468 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 EMID1Q96A84 441 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 FAM122AQ96E09 287 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 PAWRQ96IZ0 340 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ASB2Q96Q27 587 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 GAS2L1Q99501 681 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 TSPAN10Q9H1Z9 355 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ARHGEF10LQ9HCE6 1279 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 VTA1Q9NP79 307 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 CABP5Q9NP86 173 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 NYAP2Q9P242 653 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 STK39Q9UEW8 545 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 TMX2Q9Y320 296 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 EMSYQ7Z589 1322 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 TRIM75PA6NK02 468 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ASB14A6NK59 587 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 PRR33A8MZF0 331 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ADAMTS4O75173 837 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ACTN1P12814 892 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 GNAT2P19087 354 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 MPSTP25325 297 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ATP1A2P50993 1020 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SWI5Q1ZZU3 235 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 LRRC26Q2I0M4 334 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 KRT24Q2M2I5 525 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SH3PXD2AQ5TCZ1 1133 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 RPAINQ86UA6 219 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ZFPM1Q8IX07 1006 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 DHX37Q8IY37 1157 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SIX5Q8N196 739 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 MXD3Q9BW11 206 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SLC6A16Q9GZN6 736 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SPC25Q9HBM1 224 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 CTNNA3Q9UI47 895 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 MSRAQ9UJ68 235 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 FAM184BQ9ULE4 1060 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 HCN4Q9Y3Q4 1203 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 RBM19Q9Y4C8 960 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 USP3Q9Y6I4 520 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 FLT1P17948 1338 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 WDR19Q8NEZ3 1342 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 ZMYM2Q9UBW7 1377 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 IGKV6D-41A0A0C4DH26 115 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 PROB1E7EW31 1015 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 TCERG1O14776 1098 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ICMTO60725 284 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ADH1BP00325 375 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ZFYP08048 801 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 RARBP10826 455 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 HOXD8P13378 290 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ATP2B2Q01814 1243 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 MECOMQ03112 1051 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 UBE3CQ15386 1083 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 LEXMQ3ZCV2 418 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 CCDC158Q5M9N0 1113 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 TEX11Q8IYF3 940 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 CAGE1Q8TC20 777 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ZKSCAN4Q969J2 545 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 CDX2Q99626 313 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 CCDC8Q9H0W5 538 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 IGSF5Q9NSI5 407 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 SQORQ9Y6N5 450 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 AOX1Q06278 1338 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 RAD50Q92878 1312 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 TMEM229AB2RXF0 380 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 RBAK-RBAKDNI3L0D1 243 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ERVH48-1M5A8F1 160 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ARVCFO00192 962 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 RECKO95980 971 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 GNAI2P04899 355 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 EXOSC9Q06265 439 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 RASGRF1Q13972 1273 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 LRRC41Q15345 812 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 MAP7D1Q3KQU3 841 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 IQSEC1Q6DN90 963 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 PDE12Q6L8Q7 609 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 NFRKBQ6P4R8 1299 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 SLC51AQ86UW1 340 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 BPHLQ86WA6 291 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 TRIM50Q86XT4 487 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 AMOTL1Q8IY63 956 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 GMCL1Q96IK5 515 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 MAML3Q96JK9 1138 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 KCTD15Q96SI1 283 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 P2RX7Q99572 595 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 CRNKL1Q9BZJ0 848 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 SPATC1LQ9H0A9 340 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 VCPKMTQ9H867 229 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ZNF358Q9NW07 568 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 ARPP21Q9UBL0 812 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 FEM1BQ9UK73 627 aa3.28□□□□□ -1.88
DEPDC1-203ENST00000488146 A0A1W2PRU2 124 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 WTIPA6NIX2 430 aaPredicted RBP3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 RNF223E7ERA6 249 aa3.27□□□□□ -1.89
DEPDC1-203ENST00000488146 ZBTB39O15060 712 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms