RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	CAPN2	P17655	700 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	GNAT2	P19087	354 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	TOB1	P50616	345 aa	Predicted RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	MAP2K1	Q02750	393 aa	Predicted RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	KARS	Q15046	597 aa	Known RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	RTN1	Q16799	776 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ADGRA1	Q86SQ6	560 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	MRPL44	Q9H9J2	332 aa	Known RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ADD3	Q9UEY8	706 aa	Known RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ATRNL1	Q5VV63	1379 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	FOXN1	O15353	648 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ENTPD3	O75355	529 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	PPP4C	P60510	307 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	HSP90B2P	Q58FF3	399 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CDKAL1	Q5VV42	579 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ZFPM1	Q8IX07	1006 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	FERMT2	Q96AC1	680 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	STRBP	Q96SI9	672 aa	Known RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	NAPB	Q9H115	298 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	RASSF4	Q9H2L5	321 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ANKZF1	Q9H8Y5	726 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ZNF532	Q9HCE3	1301 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	MED4	Q9NPJ6	270 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	DDX4	Q9NQI0	724 aa	Known RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	SAMSN1	Q9NSI8	373 aa	Known RBP	10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	L1RE1	Q9UN81	338 aa		10.23	□□□□□ -0.77
SH3YL1-222	ENST00000479739	COL2A1	P02458	1487 aa	Predicted RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CTAGE15	A4D2H0	777 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	SOWAHD	A6NJG2	315 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	PRR29	P0C7W0	189 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CTAGE8	P0CG41	777 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	PDE6A	P16499	860 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	RXRA	P19793	462 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	LMAN1	P49257	510 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	RBL2	Q08999	1139 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	TCP10	Q12799	353 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	NOM1	Q5C9Z4	860 aa	Known RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	AKNAD1	Q5T1N1	836 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	TMED8	Q6PL24	325 aa	Predicted RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	APTX	Q7Z2E3	356 aa	Known RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	SH3RF1	Q7Z6J0	888 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CTAGE6	Q86UF2	777 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CTAGE4	Q8IX94	777 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ANKRD20A12P	Q8NF67	263 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	FAM71B	Q8TC56	605 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CLMN	Q96JQ2	1002 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	NAPG	Q99747	312 aa	Predicted RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	DESI2	Q9BSY9	194 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	EPC1	Q9H2F5	836 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	RNF41	Q9H4P4	317 aa	Predicted RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	TCRBV5S4A2T	A0A5A2	114 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	IDH1	O75874	414 aa	Known RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	IREB2	P48200	963 aa	Known RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CUL4B	Q13620	913 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	WTAP	Q15007	396 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ZNF569	Q5MCW4	686 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	WDR93	Q6P2C0	686 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CTR9	Q6PD62	1173 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	RAD9B	Q6WBX8	426 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	MFSD6	Q6ZSS7	791 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	SH3BP5L	Q7L8J4	393 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	TRMT44	Q8IYL2	757 aa	Known RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ANKRD13A	Q8IZ07	590 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	IFNL3	Q8IZI9	196 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	GOLGA6L1	Q8N7Z2	621 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	STAG1	Q8WVM7	1258 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	RNF26	Q9BY78	433 aa	Predicted RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	NACAP1	Q9BZK3	213 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	VIPAS39	Q9H9C1	493 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ZCCHC17	Q9NP64	241 aa	Known RBP	10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	LZTFL1	Q9NQ48	299 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	ZSWIM5	Q9P217	1185 aa		10.22	□□□□□ -0.77
SH3YL1-222	ENST00000479739	SIPA1L1	O43166	1804 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	LRRC10B	A6NIK2	292 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	TRIM75P	A6NK02	468 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	MAP3K10	Q02779	954 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	MAP3K12	Q12852	859 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	MAP9	Q49MG5	647 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CYP26C1	Q6V0L0	522 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CTCFL	Q8NI51	663 aa	Predicted RBP	10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	HOOK2	Q96ED9	719 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739	CSRNP1	Q96S65	589 aa		10.21	□□□□□ -0.77
SH3YL1-222	ENST00000479739		H3BQF6	201 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	HSP90AA4P	Q58FG1	418 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SPECC1	Q5M775	1068 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SPRYD7	Q5W111	196 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SRL	Q86TD4	932 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	RPGRIP1	Q96KN7	1286 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MED15	Q96RN5	788 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	CSRNP2	Q9H175	543 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	LIMA1	Q9UHB6	759 aa	Known RBP	10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	ZNF112	Q9UJU3	913 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	PCDHB6	Q9Y5E3	794 aa		10.21	□□□□□ -0.78
SH3YL1-222	ENST00000479739	DDTL	A6NHG4	134 aa	Predicted RBP	10.2	□□□□□ -0.78
SH3YL1-222	ENST00000479739	MYO1C	O00159	1063 aa		10.2	□□□□□ -0.78

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