RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 DEXIO95424 95 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 SMARCA1P28370 1054 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 CYP2C19P33261 490 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 CCDC96Q2M329 555 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 SLC35G1Q2M3R5 365 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 ZNF792Q3KQV3 632 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 LARP1BQ659C4 914 aaKnown RBP15.3■□□□□ 0.04
BRAT1-205ENST00000473879 RGS22Q8NE09 1264 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 CNTNAP5Q8WYK1 1306 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 RANBP17Q9H2T7 1088 aaKnown RBP15.3■□□□□ 0.04
BRAT1-205ENST00000473879 ZNFX1Q9P2E3 1918 aaKnown RBP15.3■□□□□ 0.04
BRAT1-205ENST00000473879 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 OGDHLQ9ULD0 1010 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 PRR12Q9ULL5 1215 aa15.3■□□□□ 0.04
BRAT1-205ENST00000473879 LCTP09848 1927 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 STX6O43752 255 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 PGK2P07205 417 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 SYT1P21579 422 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 TKFCQ3LXA3 575 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
BRAT1-205ENST00000473879 LHX8Q68G74 356 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 PHKBQ93100 1093 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 MTMR8Q96EF0 704 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 SPZ1Q9BXG8 430 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
BRAT1-205ENST00000473879 DNAJC25-GNG10A0A024R161 153 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 KLRF2D3W0D1 207 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 H3BQV1 296 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 PRPF3O43395 683 aaKnown RBP15.28■□□□□ 0.04
BRAT1-205ENST00000473879 MSCO60682 206 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 CYBAP13498 195 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 FDPSP14324 419 aaKnown RBP15.28■□□□□ 0.04
BRAT1-205ENST00000473879 FUT2Q10981 343 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 TTBK2Q6IQ55 1244 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 CCDC82Q8N4S0 544 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 SRBD1Q8N5C6 995 aaKnown RBP15.28■□□□□ 0.04
BRAT1-205ENST00000473879 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 AGBL1Q96MI9 1066 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 HTATIP2Q9BUP3 242 aa15.28■□□□□ 0.04
BRAT1-205ENST00000473879 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.04
BRAT1-205ENST00000473879 VPS37CA5D8V6 355 aaPredicted RBP15.27■□□□□ 0.04
BRAT1-205ENST00000473879 SLC34A2O95436 690 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 XBP1P17861 261 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 TRIM29Q14134 588 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 SYDE2Q5VT97 1194 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 CMTR1Q8N1G2 835 aaKnown RBP15.27■□□□□ 0.04
BRAT1-205ENST00000473879 MSL3Q8N5Y2 521 aaKnown RBP15.27■□□□□ 0.04
BRAT1-205ENST00000473879 C8orf76Q96K31 380 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 TINF2Q9BSI4 451 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 ALG1Q9BT22 464 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 ACAD9Q9H845 621 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 GPCPD1Q9NPB8 672 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 DDX20Q9UHI6 824 aaKnown RBP15.27■□□□□ 0.04
BRAT1-205ENST00000473879 NRBP1Q9UHY1 535 aa15.27■□□□□ 0.04
BRAT1-205ENST00000473879 DTNBO60941 627 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 PPFIA3O75145 1194 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 BRD1O95696 1058 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 ICAM1P05362 532 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 GOLGA8HP0CJ92 632 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 ZSCAN22P10073 491 aaPredicted RBP15.26■□□□□ 0.03
BRAT1-205ENST00000473879 CNGA1P29973 690 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 SLC16A2P36021 539 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
BRAT1-205ENST00000473879 CCDC174Q6PII3 467 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 NECAB2Q7Z6G3 386 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
BRAT1-205ENST00000473879 ANKRD35Q8N283 1001 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 PAWRQ96IZ0 340 aaKnown RBP15.26■□□□□ 0.03
BRAT1-205ENST00000473879 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 RNF146Q9NTX7 359 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 SEC63Q9UGP8 760 aaKnown RBP15.26■□□□□ 0.03
BRAT1-205ENST00000473879 PNMA2Q9UL42 364 aa15.26■□□□□ 0.03
BRAT1-205ENST00000473879 SEPT4O43236 478 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 ALAS1P13196 640 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 SNAP25P60880 206 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 DIS3LQ8TF46 1054 aaKnown RBP15.25■□□□□ 0.03
BRAT1-205ENST00000473879 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
BRAT1-205ENST00000473879 RIOX1Q9H6W3 641 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 HOMER2Q9NSB8 354 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 CCPG1Q9ULG6 757 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 MTMR6Q9Y217 621 aa15.25■□□□□ 0.03
BRAT1-205ENST00000473879 V9GY48 417 aaPredicted RBP15.25■□□□□ 0.03
BRAT1-205ENST00000473879 SYNGAP1Q96PV0 1343 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 ALPK3Q96L96 1907 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 hCG_1984214I3L0E3 225 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 CYTH3O43739 400 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 SCG2P13521 617 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 PKP1Q13835 747 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
BRAT1-205ENST00000473879 PRAMEF19Q5SWL8 479 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
BRAT1-205ENST00000473879 ZNF713Q8N859 430 aaPredicted RBP15.24■□□□□ 0.03
BRAT1-205ENST00000473879 DPF3Q92784 378 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 A1CFQ9NQ94 594 aaKnown RBP15.24■□□□□ 0.03
BRAT1-205ENST00000473879 ATP6V1DQ9Y5K8 247 aa15.24■□□□□ 0.03
BRAT1-205ENST00000473879 LRRC37A2A6NM11 1700 aa15.23■□□□□ 0.03
BRAT1-205ENST00000473879 PFASO15067 1338 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms