RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 SNAI1O95863 264 aaPredicted RBP17.97■□□□□ 0.47
FDPS-205ENST00000465559 HSD17B4P51659 736 aa17.97■□□□□ 0.47
FDPS-205ENST00000465559 PWP2Q15269 919 aaKnown RBP17.97■□□□□ 0.47
FDPS-205ENST00000465559 RNF207Q6ZRF8 634 aa17.97■□□□□ 0.47
FDPS-205ENST00000465559 CCDC82Q8N4S0 544 aa17.97■□□□□ 0.47
FDPS-205ENST00000465559 KATNBL1Q9H079 304 aa17.97■□□□□ 0.47
FDPS-205ENST00000465559 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■■■■□ 24.8
FDPS-205ENST00000465559 HMX1Q9NP08 348 aaPredicted RBP17.97■□□□□ 0.47
FDPS-205ENST00000465559 MAP3K20Q9NYL2 800 aaKnown RBP17.97■□□□□ 0.47
FDPS-205ENST00000465559 IFNAR1P17181 557 aa17.96■□□□□ 0.47
FDPS-205ENST00000465559 CCND3P30281 292 aaPredicted RBP17.96■□□□□ 0.47
FDPS-205ENST00000465559 GJA8P48165 433 aa17.96■□□□□ 0.47
FDPS-205ENST00000465559 MCF2L2Q86YR7 1114 aa17.96■□□□□ 0.47
FDPS-205ENST00000465559 SYTL5Q8TDW5 730 aaPredicted RBP17.96■□□□□ 0.47
FDPS-205ENST00000465559 LARP6Q9BRS8 491 aaKnown RBP17.96■□□□□ 0.47
FDPS-205ENST00000465559 CRISPLD2Q9H0B8 497 aa17.96■□□□□ 0.47
FDPS-205ENST00000465559 RNF208Q9H0X6 261 aa17.96■□□□□ 0.47
FDPS-205ENST00000465559 COL20A1Q9P218 1284 aa17.96■□□□□ 0.47
FDPS-205ENST00000465559 TPCN1Q9ULQ1 816 aa17.96■□□□□ 0.47
FDPS-205ENST00000465559 hCG_1642624A0A1W2PR95 340 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 PTPDC1A2A3K4 754 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 ZNF865P0CJ78 1059 aaPredicted RBP17.95■□□□□ 0.46
FDPS-205ENST00000465559 EDNRBP24530 442 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 RGS19P49795 217 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 NEK4P51957 841 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 LHX8Q68G74 356 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 ARMCX2Q7L311 632 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 DNERQ8NFT8 737 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 PIBF1Q8WXW3 757 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 SHISA4Q96DD7 197 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 TBC1D32Q96NH3 1257 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 TMEM106CQ9BVX2 250 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
FDPS-205ENST00000465559 SEC63Q9UGP8 760 aaKnown RBP17.95■□□□□ 0.46
FDPS-205ENST00000465559 V9GY48 417 aaPredicted RBP17.95■□□□□ 0.46
FDPS-205ENST00000465559 KIAA1217Q5T5P2 1943 aa17.95■□□□□ 0.46
FDPS-205ENST00000465559 ASB14A6NK59 587 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 PFKFB2O60825 505 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 SGPL1O95470 568 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 MYCP01106 439 aaPredicted RBP17.94■□□□□ 0.46
FDPS-205ENST00000465559 CAPN2P17655 700 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 ALDH5A1P51649 535 aaPredicted RBP17.94■□□□□ 0.46
FDPS-205ENST00000465559 SOX10P56693 466 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 CCT2P78371 535 aaKnown RBP17.94■□□□□ 0.46
FDPS-205ENST00000465559 PKN1Q16512 942 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 PRAMEF19Q5SWL8 479 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 TYW1BQ6NUM6 668 aa17.94■□□□□ 0.46
FDPS-205ENST00000465559 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
FDPS-205ENST00000465559 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
FDPS-205ENST00000465559 MKI67P46013 3256 aaKnown RBP17.94■□□□□ 0.46
FDPS-205ENST00000465559 PRPF3O43395 683 aaKnown RBP17.93■□□□□ 0.46
FDPS-205ENST00000465559 CALML3P27482 149 aa17.93■□□□□ 0.46
FDPS-205ENST00000465559 SCRN1Q12765 414 aa17.93■□□□□ 0.46
FDPS-205ENST00000465559 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
FDPS-205ENST00000465559 U2AF1L4Q8WU68 220 aaKnown RBP17.93■□□□□ 0.46
FDPS-205ENST00000465559 DEFB118Q96PH6 123 aa17.93■□□□□ 0.46
FDPS-205ENST00000465559 TAAR1Q96RJ0 339 aa17.93■□□□□ 0.46
FDPS-205ENST00000465559 RNF26Q9BY78 433 aaPredicted RBP17.93■□□□□ 0.46
FDPS-205ENST00000465559 ABHD16BQ9H3Z7 469 aa17.93■□□□□ 0.46
FDPS-205ENST00000465559 ADD3Q9UEY8 706 aaKnown RBP17.93■□□□□ 0.46
FDPS-205ENST00000465559 hCG_1984214I3L0E3 225 aa17.92■□□□□ 0.46
FDPS-205ENST00000465559 PIK3CDO00329 1044 aa17.92■□□□□ 0.46
FDPS-205ENST00000465559 MEIS2O14770 477 aa17.92■□□□□ 0.46
FDPS-205ENST00000465559 SEPT4O43236 478 aa17.92■□□□□ 0.46
FDPS-205ENST00000465559 CFBP00751 764 aa17.92■□□□□ 0.46
FDPS-205ENST00000465559 EN2P19622 333 aaPredicted RBP17.92■□□□□ 0.46
FDPS-205ENST00000465559 ME3Q16798 604 aa17.92■□□□□ 0.46
FDPS-205ENST00000465559 PFKFB3Q16875 520 aaPredicted RBP17.92■□□□□ 0.46
FDPS-205ENST00000465559 ZNF713Q8N859 430 aaPredicted RBP17.92■□□□□ 0.46
FDPS-205ENST00000465559 OGDHLQ9ULD0 1010 aa17.92■□□□□ 0.46
FDPS-205ENST00000465559 DDX49Q9Y6V7 483 aaKnown RBP17.92■□□□□ 0.46
FDPS-205ENST00000465559 STXBP3O00186 592 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 LARGE1O95461 756 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 ACVR2BQ13705 512 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 UBE2Q1Q7Z7E8 422 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 TEX2Q8IWB9 1127 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 GPKOWQ92917 476 aaPredicted RBP eCLIP17.91■□□□□ 0.463e-6■□□□□ 10.1
FDPS-205ENST00000465559 PHKBQ93100 1093 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 UPF2Q9HAU5 1272 aaKnown RBP17.91■□□□□ 0.46
FDPS-205ENST00000465559 BARHL2Q9NY43 387 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 RBM27Q9P2N5 1060 aaKnown RBP17.91■□□□□ 0.46
FDPS-205ENST00000465559 DDX20Q9UHI6 824 aaKnown RBP17.91■□□□□ 0.46
FDPS-205ENST00000465559 FRMPD4Q14CM0 1322 aa17.91■□□□□ 0.46
FDPS-205ENST00000465559 GCOM1H8Y6P7 765 aaPredicted RBP17.9■□□□□ 0.46
FDPS-205ENST00000465559 MSCO60682 206 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 POLR2MP0CAP2 368 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 SCG2P13521 617 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 MNX1P50219 401 aaPredicted RBP17.9■□□□□ 0.46
FDPS-205ENST00000465559 STK3Q13188 491 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 RABEP1Q15276 862 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 TAPT1Q6NXT6 567 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 PPP1R18Q6NYC8 613 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
FDPS-205ENST00000465559 RBM47A0AV96 593 aaKnown RBP17.89■□□□□ 0.45
FDPS-205ENST00000465559 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
FDPS-205ENST00000465559 HOXA13P31271 388 aaPredicted RBP17.89■□□□□ 0.45
FDPS-205ENST00000465559 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms