RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 MAD2L2Q9UI95 211 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 LRRC37A2A6NM11 1700 aa20.38■□□□□ 0.85
SCARNA2-201ENST00000458748 A0A1W2PQ45 241 aaPredicted RBP20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 A0A1W2PQY0 241 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 PALM3A6NDB9 673 aaPredicted RBP20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 CCDC69A6NI79 296 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 ACLYP53396 1101 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 GJA9P57773 515 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 RPS6P62753 249 aaKnown RBP20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 KRT32Q14532 448 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 QRICH1Q2TAL8 776 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 CCSAPQ6IQ19 270 aaPredicted RBP20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 CHST3Q7LGC8 479 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 CTCFLQ8NI51 663 aaPredicted RBP20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 IGDCC4Q8TDY8 1250 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 MAP3K14Q99558 947 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 PPP4R2Q9NY27 417 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 ATP11BQ9Y2G3 1177 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
SCARNA2-201ENST00000458748 ZBTB5O15062 677 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 DDAH1O94760 285 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 CALM1P0DP23 149 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 CALM2P0DP24 149 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 CALM3P0DP25 149 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 ALDH5A1P51649 535 aaPredicted RBP20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 TNFAIP2Q03169 654 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 KCNA10Q16322 511 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 IQSEC1Q6DN90 963 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 TDHQ8IZJ6 230 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 STAG2Q8N3U4 1231 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 LZTS2Q9BRK4 669 aa20.36■□□□□ 0.85
SCARNA2-201ENST00000458748 ADCY6O43306 1168 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 C6orf222P0C671 652 aaPredicted RBP20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 GNAQP50148 359 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 ANTXR2P58335 489 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 PDE4DQ08499 809 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 TROAPQ12815 778 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 TRIM60Q495X7 471 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 SLC30A10Q6XR72 485 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 LBHD1Q9BQE6 289 aaPredicted RBP20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 MAP3K20Q9NYL2 800 aaKnown RBP20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 Q9Y3F1 56 aa20.35■□□□□ 0.85
SCARNA2-201ENST00000458748 ELP1O95163 1332 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 REC8O95072 547 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 HMGB1P09429 215 aaKnown RBP20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 LIFRP42702 1097 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 TAPT1Q6NXT6 567 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 SYNE3Q6ZMZ3 975 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 SAMD3Q8N6K7 520 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 AP5M1Q9H0R1 490 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 LY9Q9HBG7 655 aa20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
SCARNA2-201ENST00000458748 LTBP2Q14767 1821 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 ZEB2O60315 1214 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 LRIT3Q3SXY7 679 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 GNASQ5JWF2 1037 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 NSUN6Q8TEA1 469 aaKnown RBP20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 MTMR8Q96EF0 704 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 GLT1D1Q96MS3 346 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 TOX2Q96NM4 488 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 NEK1Q96PY6 1258 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 PURBQ96QR8 312 aaKnown RBP20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 RIOX1Q9H6W3 641 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 STARD7Q9NQZ5 370 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 PCDHA1Q9Y5I3 950 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.85
SCARNA2-201ENST00000458748 MYADML2A6NDP7 307 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 SH2B2O14492 632 aaPredicted RBP20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 ASGR1P07306 291 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 SMARCA1P28370 1054 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 TLE2Q04725 743 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 TSGA10IPQ3SY00 556 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 EEPD1Q7L9B9 569 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 ANKRD33Q7Z3H0 272 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 FBXO16Q8IX29 292 aaPredicted RBP20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 SENP2Q9HC62 589 aa20.32■□□□□ 0.84
SCARNA2-201ENST00000458748 LAMA3Q16787 3333 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 PNMA6FA0A0J9YX94 578 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 CTAGE5O15320 804 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 SMPD1P17405 629 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 EDNRBP24530 442 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 BRDTQ58F21 947 aaPredicted RBP20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 TLK2Q86UE8 772 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 RRP36Q96EU6 259 aaKnown RBP20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 IWS1Q96ST2 819 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 PDLIM7Q9NR12 457 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 PDGFCQ9NRA1 345 aa20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 SEC63Q9UGP8 760 aaKnown RBP20.31■□□□□ 0.84
SCARNA2-201ENST00000458748 MROH7Q68CQ1 1323 aa20.3■□□□□ 0.84
SCARNA2-201ENST00000458748 RBM47A0AV96 593 aaKnown RBP20.3■□□□□ 0.84
SCARNA2-201ENST00000458748 NKRFO15226 690 aaKnown RBP eCLIP20.3■□□□□ 0.84not detected■□□□□ 9
SCARNA2-201ENST00000458748 CABYRO75952 493 aa20.3■□□□□ 0.84
SCARNA2-201ENST00000458748 CFBP00751 764 aa20.3■□□□□ 0.84
SCARNA2-201ENST00000458748 CLTBP09497 229 aa20.3■□□□□ 0.84
SCARNA2-201ENST00000458748 FSCN1Q16658 493 aaKnown RBP20.3■□□□□ 0.84
SCARNA2-201ENST00000458748 DUSP28Q4G0W2 176 aa20.3■□□□□ 0.84
SCARNA2-201ENST00000458748 Q7L0L9 218 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms