RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PRAMEF19Q5SWL8 479 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 FBXO11Q86XK2 927 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 CMTR1Q8N1G2 835 aaKnown RBP20.5■□□□□ 0.87
CCDC188-201ENST00000439765 FAM133AQ8N9E0 248 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 MTMR8Q96EF0 704 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 IL17RAQ96F46 866 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 RIOX1Q9H6W3 641 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 ZMYND8Q9ULU4 1186 aaPredicted RBP20.5■□□□□ 0.87
CCDC188-201ENST00000439765 ABCB11O95342 1321 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 BRF1Q92994 677 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 PURBQ96QR8 312 aaKnown RBP20.5■□□□□ 0.87
CCDC188-201ENST00000439765 AMNQ9BXJ7 453 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 UPF3BQ9BZI7 483 aaKnown RBP20.5■□□□□ 0.87
CCDC188-201ENST00000439765 ASTN1O14525 1302 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 ZBTB43O43298 467 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 CALML3P27482 149 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 APOBRQ0VD83 1088 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 BAATQ14032 418 aaPredicted RBP20.49■□□□□ 0.87
CCDC188-201ENST00000439765 RNF207Q6ZRF8 634 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 FANCBQ8NB91 859 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 ARRDC4Q8NCT1 418 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 KIF2CQ99661 725 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 SPZ1Q9BXG8 430 aa20.49■□□□□ 0.87
CCDC188-201ENST00000439765 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
CCDC188-201ENST00000439765 SYNGAP1Q96PV0 1343 aa20.48■□□□□ 0.87
CCDC188-201ENST00000439765 SOWAHBA6NEL2 793 aa20.48■□□□□ 0.87
CCDC188-201ENST00000439765 GOLGA8BA8MQT2 603 aa20.48■□□□□ 0.87
CCDC188-201ENST00000439765 RUFY3Q7L099 469 aa20.48■□□□□ 0.87
CCDC188-201ENST00000439765 ZNF467Q7Z7K2 595 aaPredicted RBP20.48■□□□□ 0.87
CCDC188-201ENST00000439765 SENP6Q9GZR1 1112 aaPredicted RBP20.48■□□□□ 0.87
CCDC188-201ENST00000439765 GOLGA8AA7E2F4 631 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 SYN1P17600 705 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 GNAQP50148 359 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 RPS6P62753 249 aaKnown RBP20.47■□□□□ 0.87
CCDC188-201ENST00000439765 RTN1Q16799 776 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 ARMCX2Q7L311 632 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 CCDC82Q8N4S0 544 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 SRBD1Q8N5C6 995 aaKnown RBP20.47■□□□□ 0.87
CCDC188-201ENST00000439765 ZSWIM6Q9HCJ5 1215 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 CNPY2Q9Y2B0 182 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 PCDHA1Q9Y5I3 950 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 CYP46A1Q9Y6A2 500 aa20.47■□□□□ 0.87
CCDC188-201ENST00000439765 SNAI1O95863 264 aaPredicted RBP20.46■□□□□ 0.87
CCDC188-201ENST00000439765 TMTC3Q6ZXV5 915 aa20.46■□□□□ 0.87
CCDC188-201ENST00000439765 MSL3Q8N5Y2 521 aaKnown RBP20.46■□□□□ 0.87
CCDC188-201ENST00000439765 RRP36Q96EU6 259 aaKnown RBP20.46■□□□□ 0.87
CCDC188-201ENST00000439765 LZTS2Q9BRK4 669 aa20.46■□□□□ 0.87
CCDC188-201ENST00000439765 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
CCDC188-201ENST00000439765 ZHX1Q9UKY1 873 aaPredicted RBP20.46■□□□□ 0.87
CCDC188-201ENST00000439765 MRPL11Q9Y3B7 192 aaKnown RBP20.46■□□□□ 0.87
CCDC188-201ENST00000439765 PNMA6FA0A0J9YX94 578 aa20.45■□□□□ 0.86
CCDC188-201ENST00000439765 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
CCDC188-201ENST00000439765 MAGEA10P43363 369 aaPredicted RBP20.45■□□□□ 0.86
CCDC188-201ENST00000439765 GJC2Q5T442 439 aaPredicted RBP20.45■□□□□ 0.86
CCDC188-201ENST00000439765 TM6SF1Q9BZW5 370 aa20.45■□□□□ 0.86
CCDC188-201ENST00000439765 TSHZ2Q9NRE2 1034 aa20.45■□□□□ 0.86
CCDC188-201ENST00000439765 SEC63Q9UGP8 760 aaKnown RBP20.45■□□□□ 0.86
CCDC188-201ENST00000439765 KBTBD13C9JR72 458 aa20.44■□□□□ 0.86
CCDC188-201ENST00000439765 TBC1D5Q92609 795 aa20.44■□□□□ 0.86
CCDC188-201ENST00000439765 AGXT2Q9BYV1 514 aa20.44■□□□□ 0.86
CCDC188-201ENST00000439765 RBM28Q9NW13 759 aaKnown RBP20.44■□□□□ 0.86
CCDC188-201ENST00000439765 KIAA1217Q5T5P2 1943 aa20.44■□□□□ 0.86
CCDC188-201ENST00000439765 CNTNAP5Q8WYK1 1306 aa20.44■□□□□ 0.86
CCDC188-201ENST00000439765 OPLAHO14841 1288 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 CFBP00751 764 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 ZNF865P0CJ78 1059 aaPredicted RBP20.43■□□□□ 0.86
CCDC188-201ENST00000439765 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCDC188-201ENST00000439765 ALDH5A1P51649 535 aaPredicted RBP20.43■□□□□ 0.86
CCDC188-201ENST00000439765 LENG1Q96BZ8 264 aaPredicted RBP20.43■□□□□ 0.86
CCDC188-201ENST00000439765 ADD3Q9UEY8 706 aaKnown RBP20.43■□□□□ 0.86
CCDC188-201ENST00000439765 ASB14A6NK59 587 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 RARBP10826 455 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 SMARCA1P28370 1054 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 CDC27P30260 824 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 TOB2Q14106 344 aaPredicted RBP20.43■□□□□ 0.86
CCDC188-201ENST00000439765 SNX17Q15036 470 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 LRRC41Q15345 812 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 MCF2L2Q86YR7 1114 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 FBXL16Q8N461 479 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
CCDC188-201ENST00000439765 AKR1A1P14550 325 aa20.42■□□□□ 0.86
CCDC188-201ENST00000439765 RCAN1P53805 252 aa20.42■□□□□ 0.86
CCDC188-201ENST00000439765 ATN1P54259 1190 aaPredicted RBP20.42■□□□□ 0.86
CCDC188-201ENST00000439765 ACVR2BQ13705 512 aa20.42■□□□□ 0.86
CCDC188-201ENST00000439765 EEPD1Q7L9B9 569 aa20.42■□□□□ 0.86
CCDC188-201ENST00000439765 FBXO16Q8IX29 292 aaPredicted RBP20.42■□□□□ 0.86
CCDC188-201ENST00000439765 SYTL5Q8TDW5 730 aaPredicted RBP20.42■□□□□ 0.86
CCDC188-201ENST00000439765 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
CCDC188-201ENST00000439765 ABHD16BQ9H3Z7 469 aa20.42■□□□□ 0.86
CCDC188-201ENST00000439765 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
CCDC188-201ENST00000439765 NID2Q14112 1375 aa20.42■□□□□ 0.86
CCDC188-201ENST00000439765 MYCNP04198 464 aaPredicted RBP20.41■□□□□ 0.86
CCDC188-201ENST00000439765 HOXA13P31271 388 aaPredicted RBP20.41■□□□□ 0.86
CCDC188-201ENST00000439765 RTP1P59025 263 aa20.41■□□□□ 0.86
CCDC188-201ENST00000439765 TRAF1Q13077 416 aa20.41■□□□□ 0.86
CCDC188-201ENST00000439765 RABEP1Q15276 862 aa20.41■□□□□ 0.86
CCDC188-201ENST00000439765 RGS22Q8NE09 1264 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms