RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 COPB1P53618 953 aaKnown RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 RINT1Q6NUQ1 792 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 RYBPQ8N488 228 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 CCDC51Q96ER9 411 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 SLC24A3Q9HC58 644 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 ARMCX3Q9UH62 379 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 EPN1Q9Y6I3 576 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 IQGAP2Q13576 1575 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 C11orf57Q6ZUT1 292 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 RASGRP4Q8TDF6 673 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 USP40Q9NVE5 1235 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 IBTKQ9P2D0 1353 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 KDM3AQ9Y4C1 1321 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 PDCD2Q16342 344 aaPredicted RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 ALKBH8Q96BT7 664 aaKnown RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 LRRIQ4A6NIV6 560 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 HEXIM1O94992 359 aaKnown RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 BTG4Q9NY30 223 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 A6NJR5 290 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 CLIC2O15247 247 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 DKC1O60832 514 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 EEF1DP29692 281 aaKnown RBP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 TEKT1Q969V4 418 aa12.45□□□□□ -0.42
SEC16A-206ENST00000431893 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC16A-206ENST00000431893 TTC30BQ8N4P2 665 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 RPGRIP1Q96KN7 1286 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 BTBD18B2RXH4 712 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 KCNV2Q8TDN2 545 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 hCG_2014768A0A024R1R8 64 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 USP17L21D6R901 530 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 HAUS2Q9NVX0 235 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 RTEL1Q9NZ71 1219 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 ANAPC5Q9UJX4 755 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 MAP3K7O43318 606 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 PLS3P13797 630 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
SEC16A-206ENST00000431893 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
SEC16A-206ENST00000431893 FAM178BQ8IXR5 827 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 ANKRD35Q8N283 1001 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 CCNYQ8ND76 341 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 LPIN2Q92539 896 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 CCNL1Q9UK58 526 aaPredicted RBP12.44□□□□□ -0.42
SEC16A-206ENST00000431893 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 ZMYM6O95789 1325 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 CEP70Q8NHQ1 597 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 STK24Q9Y6E0 443 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 NPATQ14207 1427 aa12.44□□□□□ -0.42
SEC16A-206ENST00000431893 CNGA1P29973 690 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 YWHAEP62258 255 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 SCRN1Q12765 414 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 LARGE2Q8N3Y3 721 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 FAM133AQ8N9E0 248 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 DYDC2Q96IM9 177 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 GYG1P46976 350 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 NNTQ13423 1086 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 SMAD1Q15797 465 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 SPTLC3Q9NUV7 552 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 NOVA2Q9UNW9 492 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 ORC6Q9Y5N6 252 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.429e-8■□□□□ 8.7
SEC16A-206ENST00000431893 UBN2Q6ZU65 1347 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 CPP00450 1065 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 GTF2IP78347 998 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 PTGDRQ13258 359 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 Q3C1V9 767 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 F5H423 210 aaPredicted RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 MEIS1O00470 390 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 CTNND1O60716 968 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 OR52Z1P0C646 297 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 NSFP46459 744 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 ETF1P62495 437 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 PRPSAP1Q14558 356 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 MED4Q9NPJ6 270 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 ZNF500O60304 480 aaPredicted RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 KITP10721 976 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 SEPT8Q92599 483 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 KLHL29Q96CT2 875 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 ZMAT2Q96NC0 199 aaKnown RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 UBN1Q9NPG3 1134 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 RNF8O76064 485 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 STX1BP61266 288 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 DMP1Q13316 513 aaPredicted RBP12.43□□□□□ -0.42
SEC16A-206ENST00000431893 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms