RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 DSCC1Q9BVC3 393 aa20.82■□□□□ 0.92
GPC1-203ENST00000425056 TTYH1Q9H313 450 aaPredicted RBP20.82■□□□□ 0.92
GPC1-203ENST00000425056 ZEB2O60315 1214 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 PPIGQ13427 754 aaKnown RBP eCLIP20.81■□□□□ 0.92
GPC1-203ENST00000425056 DUSP28Q4G0W2 176 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 CCDC178Q5BJE1 867 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 TMEM63BQ5T3F8 832 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 RNF207Q6ZRF8 634 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 KIAA1211Q6ZU35 1233 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 IQCA1Q86XH1 822 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 CDX2Q99626 313 aaPredicted RBP20.81■□□□□ 0.92
GPC1-203ENST00000425056 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.92
GPC1-203ENST00000425056 SEZ6LQ9BYH1 1024 aa20.81■□□□□ 0.92
GPC1-203ENST00000425056 GRIN2DO15399 1336 aa20.8■□□□□ 0.92
GPC1-203ENST00000425056 DLL1O00548 723 aa20.8■□□□□ 0.92
GPC1-203ENST00000425056 KDM4AO75164 1064 aa20.8■□□□□ 0.92
GPC1-203ENST00000425056 ITGA7Q13683 1181 aa20.8■□□□□ 0.92
GPC1-203ENST00000425056 TMEM199Q8N511 208 aa20.8■□□□□ 0.92
GPC1-203ENST00000425056 PNMA1Q8ND90 353 aa20.8■□□□□ 0.92
GPC1-203ENST00000425056 PPP1R12CQ9BZL4 782 aa20.8■□□□□ 0.92
GPC1-203ENST00000425056 MYH6P13533 1939 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 RBM47A0AV96 593 aaKnown RBP20.79■□□□□ 0.92
GPC1-203ENST00000425056 GOLGA8HP0CJ92 632 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 CSF2RAP15509 400 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 EDNRBP24530 442 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 CALML3P27482 149 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 RPS6P62753 249 aaKnown RBP20.79■□□□□ 0.92
GPC1-203ENST00000425056 TMEM240Q5SV17 173 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 DNERQ8NFT8 737 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 ANKS1AQ92625 1134 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 WDR11Q9BZH6 1224 aa20.79■□□□□ 0.92
GPC1-203ENST00000425056 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.78■□□□□ 0.92
GPC1-203ENST00000425056 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.78■□□□□ 0.92
GPC1-203ENST00000425056 B4E1Z4 1266 aa20.78■□□□□ 0.92
GPC1-203ENST00000425056 IMMTQ16891 758 aaKnown RBP20.78■□□□□ 0.92
GPC1-203ENST00000425056 RASIP1Q5U651 963 aa20.78■□□□□ 0.92
GPC1-203ENST00000425056 C16orf59Q7L2K0 433 aa20.78■□□□□ 0.92
GPC1-203ENST00000425056 KAT14Q9H8E8 782 aa20.78■□□□□ 0.92
GPC1-203ENST00000425056 SCN10AQ9Y5Y9 1956 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 PRUNE2Q8WUY3 3088 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 DNAJB2P25686 324 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 ASPRV1Q53RT3 343 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 PSRC1Q6PGN9 363 aaPredicted RBP20.77■□□□□ 0.92
GPC1-203ENST00000425056 ENAHQ8N8S7 591 aaPredicted RBP20.77■□□□□ 0.92
GPC1-203ENST00000425056 RGS22Q8NE09 1264 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 ZSCAN10Q96SZ4 725 aaPredicted RBP20.77■□□□□ 0.92
GPC1-203ENST00000425056 MPHOSPH6Q99547 160 aaKnown RBP20.77■□□□□ 0.92
GPC1-203ENST00000425056 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 MAF1Q9H063 256 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 CPVLQ9H3G5 476 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 CTNNA3Q9UI47 895 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 CUL9Q8IWT3 2517 aa20.77■□□□□ 0.92
GPC1-203ENST00000425056 TNKSO95271 1327 aa20.77■□□□□ 0.91
GPC1-203ENST00000425056 B4GALT4O60513 344 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 CYP2C18P33260 490 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 CPT1AP50416 773 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 PSMC6P62333 389 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 PDE4DQ08499 809 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 CDC37Q16543 378 aaPredicted RBP20.76■□□□□ 0.91
GPC1-203ENST00000425056 USH1GQ495M9 461 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 MYLIPQ8WY64 445 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 IL25Q9H293 177 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 POLR3EQ9NVU0 708 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 ZSWIM5Q9P217 1185 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 UMODL1Q5DID0 1318 aa20.76■□□□□ 0.91
GPC1-203ENST00000425056 NKRFO15226 690 aaKnown RBP eCLIP20.75■□□□□ 0.91
GPC1-203ENST00000425056 PURAQ00577 322 aaKnown RBP20.75■□□□□ 0.91
GPC1-203ENST00000425056 PPP2R5BQ15173 497 aa20.75■□□□□ 0.91
GPC1-203ENST00000425056 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.75■□□□□ 0.91
GPC1-203ENST00000425056 SCFD2Q8WU76 684 aa20.75■□□□□ 0.91
GPC1-203ENST00000425056 NOC4LQ9BVI4 516 aaKnown RBP20.75■□□□□ 0.91
GPC1-203ENST00000425056 KRT23Q9C075 422 aa20.75■□□□□ 0.91
GPC1-203ENST00000425056 TRPV6Q9H1D0 765 aa20.75■□□□□ 0.91
GPC1-203ENST00000425056 CNNM2Q9H8M5 875 aa20.75■□□□□ 0.91
GPC1-203ENST00000425056 IL23AQ9NPF7 189 aa20.75■□□□□ 0.91
GPC1-203ENST00000425056 ABCB11O95342 1321 aa20.75■□□□□ 0.91
GPC1-203ENST00000425056 ACRP10323 421 aa20.74■□□□□ 0.91
GPC1-203ENST00000425056 GSPT1P15170 499 aaKnown RBP20.74■□□□□ 0.91
GPC1-203ENST00000425056 PDE4AP27815 886 aa20.74■□□□□ 0.91
GPC1-203ENST00000425056 ZNF365Q70YC5 407 aa20.74■□□□□ 0.91
GPC1-203ENST00000425056 ADGRF4Q8IZF3 695 aa20.74■□□□□ 0.91
GPC1-203ENST00000425056 OR6J1Q8NGC5 347 aa20.74■□□□□ 0.91
GPC1-203ENST00000425056 MAFAQ8NHW3 353 aaPredicted RBP20.74■□□□□ 0.91
GPC1-203ENST00000425056 ALDH8A1Q9H2A2 487 aaPredicted RBP20.74■□□□□ 0.91
GPC1-203ENST00000425056 RAD50Q92878 1312 aa20.74■□□□□ 0.91
GPC1-203ENST00000425056 KIAA1217Q5T5P2 1943 aa20.73■□□□□ 0.91
GPC1-203ENST00000425056 B4DLN1 442 aa20.73■□□□□ 0.91
GPC1-203ENST00000425056 MRPL12P52815 198 aaKnown RBP20.73■□□□□ 0.91
GPC1-203ENST00000425056 TTC22Q5TAA0 569 aa20.73■□□□□ 0.91
GPC1-203ENST00000425056 UBAC1Q9BSL1 405 aa20.73■□□□□ 0.91
GPC1-203ENST00000425056 WNT8AQ9H1J5 351 aa20.73■□□□□ 0.91
GPC1-203ENST00000425056 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
GPC1-203ENST00000425056 FOSL2P15408 326 aa20.72■□□□□ 0.91
GPC1-203ENST00000425056 QRICH1Q2TAL8 776 aa20.72■□□□□ 0.91
GPC1-203ENST00000425056 HERVK_113Q902F9 699 aa20.72■□□□□ 0.91
GPC1-203ENST00000425056 TIFAQ96CG3 184 aa20.72■□□□□ 0.91
GPC1-203ENST00000425056 MTG1Q9BT17 334 aaPredicted RBP20.72■□□□□ 0.91
GPC1-203ENST00000425056 GBF1Q92538 1859 aa20.72■□□□□ 0.91
GPC1-203ENST00000425056 TANC1Q9C0D5 1861 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms