RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 RUBCNQ92622 972 aa18.52■□□□□ 0.56
NPC1L1-203ENST00000423141 HPS3Q969F9 1004 aa18.52■□□□□ 0.56
NPC1L1-203ENST00000423141 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
NPC1L1-203ENST00000423141 BUB1O43683 1085 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 FCER1AP12319 257 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 TCP1P17987 556 aaKnown RBP18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 CDK17Q00537 523 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 RNF187Q5TA31 235 aaPredicted RBP18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 ARL6IP4Q66PJ3 421 aaKnown RBP18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 KDM7AQ6ZMT4 941 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 ZNF473Q8WTR7 871 aaKnown RBP18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 GPKOWQ92917 476 aaPredicted RBP eCLIP18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 P2RX5Q93086 422 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 MTMR8Q96EF0 704 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 EPN3Q9H201 632 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 ATXN2Q99700 1313 aaKnown RBP18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 PDE8AO60658 829 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 ERCC3P19447 782 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 HDLBPQ00341 1268 aaKnown RBP18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 CFAP58Q5T655 872 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 ABCF2Q9UG63 623 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 ANAPC4Q9UJX5 808 aa18.51■□□□□ 0.55
NPC1L1-203ENST00000423141 PAPPAQ13219 1627 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 ATP6V1AP38606 617 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 ATP2B2Q01814 1243 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 GUCY2DQ02846 1103 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 ERGIC2Q96RQ1 377 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 EPB41L5Q9HCM4 733 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 KBTBD4Q9NVX7 518 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 MYH3P11055 1940 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 AKR1B10O60218 316 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 NR1D1P20393 614 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 TNFRSF8P28908 595 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 PAFAH1B1P43034 410 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 DYNLL1P63167 89 aaKnown RBP18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 PTGISQ16647 500 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 IQCA1Q86XH1 822 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 DHTKD1Q96HY7 919 aaPredicted RBP18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 ALS2CR12Q96Q35 445 aa18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 BAZ2AQ9UIF9 1905 aaKnown RBP18.5■□□□□ 0.55
NPC1L1-203ENST00000423141 A0A1W2PQJ5 194 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 CCNE1P24864 410 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 UBA7P41226 1012 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 PSEN1P49768 467 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 PFKFB3Q16875 520 aaPredicted RBP18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 DTHD1Q6ZMT9 781 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 ZSCAN29Q8IWY8 852 aaPredicted RBP18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 NOC3LQ8WTT2 800 aaKnown RBP18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 DUOX1Q9NRD9 1551 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 PPP1R37O75864 691 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 HEXIM1O94992 359 aaKnown RBP18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 GFPT1Q06210 699 aaPredicted RBP18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 PDE4DQ08499 809 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 FAM47AQ5JRC9 791 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 KLHDC7AQ5VTJ3 777 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 CCT8L2Q96SF2 557 aa18.49■□□□□ 0.55
NPC1L1-203ENST00000423141 LRRC53A6NM62 1247 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 CHRM1P11229 460 aaPredicted RBP18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 RASSF7Q02833 373 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 IFT88Q13099 833 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 MYCBPAPQ8TBZ2 947 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 ZKSCAN4Q969J2 545 aaPredicted RBP18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 GDF3Q9NR23 364 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 PLCH1Q4KWH8 1693 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 DDAH1O94760 285 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 CALM1P0DP23 149 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 CALM2P0DP24 149 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 CALM3P0DP25 149 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 HNRNPH3P31942 346 aaKnown RBP18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 MAGEA1P43355 309 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 SETQ01105 290 aaPredicted RBP18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 KCTD19Q17RG1 926 aaPredicted RBP18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 FIGNQ5HY92 759 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 NLRP14Q86W24 1093 aa18.48■□□□□ 0.55
NPC1L1-203ENST00000423141 A6NNZ2 444 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 IBSPP21815 317 aaPredicted RBP18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 SLC1A4P43007 532 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 RNASE9P60153 205 aaKnown RBP18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 DDR1Q08345 913 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 TUBB8Q3ZCM7 444 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 RRAGAQ7L523 313 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 IFT20Q8IY31 132 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 BLIDQ8IZY5 108 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 MMRN2Q9H8L6 949 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 SIK3Q9Y2K2 1263 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 PLCG1P19174 1290 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 HPDP32754 393 aaPredicted RBP18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 MMP14P50281 582 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 CCDC13Q8IYE1 715 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 RIOK1Q9BRS2 568 aaKnown RBP18.47■□□□□ 0.55
NPC1L1-203ENST00000423141 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms