RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TRAPPC3LQ5T215 181 aa14.11□□□□□ -0.15
PPP4R1-202ENST00000400555 SND1Q7KZF4 910 aaKnown RBP eCLIP14.11□□□□□ -0.15
PPP4R1-202ENST00000400555 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
PPP4R1-202ENST00000400555 AKAP11Q9UKA4 1901 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 BICDL2A1A5D9 508 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 RCCD1A6NED2 376 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 EIF4A3P38919 411 aaKnown RBP14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 MAGEA1P43355 309 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 GSTO1P78417 241 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 TAF3Q5VWG9 929 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 ARL6IP4Q66PJ3 421 aaKnown RBP14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 CLEC4GQ6UXB4 293 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 GLIS3Q8NEA6 775 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 MTA3Q9BTC8 594 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 FAM204AQ9H8W3 233 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 BAZ2AQ9UIF9 1905 aaKnown RBP14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 SPATA31A1Q5TZJ5 1347 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 COL18A1P39060 1754 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 STXBP3O00186 592 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 APBA1Q02410 837 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 BEND6Q5SZJ8 279 aaPredicted RBP14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 DNAAF5Q86Y56 855 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 TRIM9Q9C026 710 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 BMP2KQ9NSY1 1161 aaPredicted RBP14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 BARHL2Q9NY43 387 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 TTBK2Q6IQ55 1244 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 KRT25Q7Z3Z0 450 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 FAM114A1Q8IWE2 563 aa14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 CWC15Q9P013 229 aaKnown RBP14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 REXO2Q9Y3B8 237 aaKnown RBP14.1□□□□□ -0.15
PPP4R1-202ENST00000400555 COL1A1P02452 1464 aaPredicted RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 TACC1O75410 805 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 RASA1P20936 1047 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 CCNE1P24864 410 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 NOP2P46087 812 aaKnown RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 RAPGEF1Q13905 1077 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 AMIGO3Q86WK7 504 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 PROCA1Q8NCQ7 364 aaPredicted RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 TJP1Q07157 1748 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 PBX1P40424 430 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 HERVK_113P62684 666 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 GRM4Q14833 912 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 EZH2Q15910 746 aaKnown RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 SLC35G1Q2M3R5 365 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 LRRIQ3A6PVS8 624 aaPredicted RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 TRIM66O15016 1216 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 SEMA3EO15041 775 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 EEF1GP26641 437 aaKnown RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 HERC4Q5GLZ8 1057 aaPredicted RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 CNNM4Q6P4Q7 775 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 ELOA2Q8IYF1 753 aaPredicted RBP14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 FAM107BQ9H098 131 aa14.09□□□□□ -0.15
PPP4R1-202ENST00000400555 NFRKBQ6P4R8 1299 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 NUDT12Q9BQG2 462 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 MEIS1O00470 390 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 PCP11498 1178 aaKnown RBP14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 LRRC15Q8TF66 581 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 BBXQ8WY36 941 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 TSG101Q99816 390 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 CDCA7Q9BWT1 371 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 PACSIN2Q9UNF0 486 aaPredicted RBP14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 PAFAH1B1P43034 410 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 ADCY7P51828 1080 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 USH1GQ495M9 461 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■■■ 55.3
PPP4R1-202ENST00000400555 NARFQ9UHQ1 456 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 GGA1Q9UJY5 639 aa14.08□□□□□ -0.16
PPP4R1-202ENST00000400555 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 GFPT1Q06210 699 aaPredicted RBP14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 FOXR1Q6PIV2 292 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 SEPT11Q9NVA2 429 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 ESYT3A0FGR9 886 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 MYMKA6NI61 221 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L15C9J2P7 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L13C9JLJ4 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L11C9JVI0 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L18D6R9N7 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L22D6RA61 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L17D6RBQ6 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L19D6RCP7 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L20D6RJB6 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 RNF40O75150 1001 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 POLR2FP61218 127 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 GPSM2P81274 684 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L24Q0WX57 530 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 MAP9Q49MG5 647 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 KCTD16Q68DU8 428 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 TTI2Q6NXR4 508 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 WDR59Q6PJI9 974 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 USP17L6PQ6QN14 398 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 LARP4BQ92615 738 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 DUSP9Q99956 384 aaKnown RBP14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 RAB34Q9BZG1 259 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 NDST4Q9H3R1 872 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 EPHB6O15197 1021 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 SLC37A4O43826 429 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 FTCDO95954 541 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 SF3A3Q12874 501 aaKnown RBP eCLIP14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 C4orf32Q8N8J7 132 aa14.07□□□□□ -0.16
PPP4R1-202ENST00000400555 CAPN11Q9UMQ6 739 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms