RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 TRAPPC10P48553 1259 aa15.92■□□□□ 0.14
GABPA-202ENST00000400075 OSBPL5Q9H0X9 879 aaPredicted RBP15.92■□□□□ 0.14
GABPA-202ENST00000400075 NRKQ7Z2Y5 1582 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 KBTBD13C9JR72 458 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 FBXO18Q8NFZ0 1043 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 SERPINA10Q9UK55 444 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.91■□□□□ 0.14
GABPA-202ENST00000400075 CAPN9O14815 690 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 SRGNP10124 158 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 METTL23Q86XA0 190 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 SLC17A8Q8NDX2 589 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 DDX12PQ92771 950 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 LSG1Q9H089 658 aaKnown RBP15.91■□□□□ 0.14
GABPA-202ENST00000400075 BLZF1Q9H2G9 400 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 TPCN1Q9ULQ1 816 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 ZBTB5O15062 677 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 DDNO94850 711 aaPredicted RBP15.91■□□□□ 0.14
GABPA-202ENST00000400075 UBE2SQ16763 222 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 MAP9Q49MG5 647 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 ATP2A1O14983 1001 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 FAM26FQ5R3K3 315 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 ZNF521Q96K83 1311 aa15.91■□□□□ 0.14
GABPA-202ENST00000400075 GAS8O95995 478 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 IFNAR1P17181 557 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 RASSF7Q02833 373 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 GTF3C2Q8WUA4 911 aaPredicted RBP15.9■□□□□ 0.14
GABPA-202ENST00000400075 PPP1R16BQ96T49 567 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 MXD3Q9BW11 206 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 SCAF8Q9UPN6 1271 aaKnown RBP15.9■□□□□ 0.14
GABPA-202ENST00000400075 STAG1Q8WVM7 1258 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 FAM167AQ96KS9 214 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 TEX13BQ9BXU2 312 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 KMT5AQ9NQR1 393 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 SPOPO43791 374 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 MCM3P25205 808 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 ZSCAN23Q3MJ62 389 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 LPAR1Q92633 364 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 NLRP4Q96MN2 994 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 PANK4Q9NVE7 773 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 AGTPBP1Q9UPW5 1226 aa15.9■□□□□ 0.14
GABPA-202ENST00000400075 ABCB11O95342 1321 aa15.89■□□□□ 0.14
GABPA-202ENST00000400075 LAD1O00515 517 aa15.89■□□□□ 0.14
GABPA-202ENST00000400075 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.14
GABPA-202ENST00000400075 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 SH2B2O14492 632 aaPredicted RBP15.89■□□□□ 0.13
GABPA-202ENST00000400075 MAP1SQ66K74 1059 aaPredicted RBP15.89■□□□□ 0.13
GABPA-202ENST00000400075 ADALQ6DHV7 355 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 NSUN4Q96CB9 384 aaKnown RBP15.89■□□□□ 0.13
GABPA-202ENST00000400075 HAUS2Q9NVX0 235 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 ZBTB33Q86T24 672 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
GABPA-202ENST00000400075 MYZAPP0CAP1 466 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 SRGAP2CP0DJJ0 459 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 LONP1P36776 959 aaKnown RBP15.89■□□□□ 0.13
GABPA-202ENST00000400075 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 CDC42EP5Q6NZY7 148 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 C1orf112Q9NSG2 853 aa15.89■□□□□ 0.13
GABPA-202ENST00000400075 UBN2Q6ZU65 1347 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 CSF1RP07333 972 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 AKR1B1P15121 316 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 MTMR1Q13613 665 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 RASEFQ8IZ41 740 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 CCDC102AQ96A19 550 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 CCDC114Q96M63 670 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 ARMCX3Q9UH62 379 aaPredicted RBP15.88■□□□□ 0.13
GABPA-202ENST00000400075 ARPP19P56211 112 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 CXCL9Q07325 125 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 RABL6Q3YEC7 729 aaPredicted RBP15.88■□□□□ 0.13
GABPA-202ENST00000400075 CCDC84Q86UT8 332 aaPredicted RBP15.88■□□□□ 0.13
GABPA-202ENST00000400075 NEDD1Q8NHV4 660 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 TMEM39BQ9GZU3 492 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 TSPYL1Q9H0U9 437 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 SYNRGQ9UMZ2 1314 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 LRMPQ12912 555 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 ARHGAP44Q17R89 818 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 CNGA4Q8IV77 575 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 IFNKQ9P0W0 207 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 PREX1Q8TCU6 1659 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 STK25O00506 426 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 C6orf222P0C671 652 aaPredicted RBP15.88■□□□□ 0.13
GABPA-202ENST00000400075 ADCK5Q3MIX3 580 aa15.88■□□□□ 0.13
GABPA-202ENST00000400075 RSRC2Q7L4I2 434 aaKnown RBP15.88■□□□□ 0.13
GABPA-202ENST00000400075 CCDC94Q9BW85 323 aaPredicted RBP15.88■□□□□ 0.13
GABPA-202ENST00000400075 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
GABPA-202ENST00000400075 GNA14O95837 355 aa15.87■□□□□ 0.13
GABPA-202ENST00000400075 GJA10Q969M2 543 aa15.87■□□□□ 0.13
GABPA-202ENST00000400075 NUDT12Q9BQG2 462 aa15.87■□□□□ 0.13
GABPA-202ENST00000400075 GTF2A2P52657 109 aa15.87■□□□□ 0.13
GABPA-202ENST00000400075 FOXP1Q9H334 677 aaPredicted RBP15.87■□□□□ 0.13
GABPA-202ENST00000400075 WDR46O15213 610 aaKnown RBP15.87■□□□□ 0.13
GABPA-202ENST00000400075 TNNC1P63316 161 aa15.87■□□□□ 0.13
GABPA-202ENST00000400075 HDLBPQ00341 1268 aaKnown RBP15.87■□□□□ 0.13
GABPA-202ENST00000400075 ZNF771Q7L3S4 317 aaPredicted RBP15.87■□□□□ 0.13
GABPA-202ENST00000400075 TXNDC16Q9P2K2 825 aa15.87■□□□□ 0.13
GABPA-202ENST00000400075 DENND3A2RUS2 1198 aa15.86■□□□□ 0.13
GABPA-202ENST00000400075 CTR9Q6PD62 1173 aa15.86■□□□□ 0.13
GABPA-202ENST00000400075 GPRC5AQ8NFJ5 357 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms