RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 NECTIN1Q15223 517 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 SCOCQ9UIL1 159 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 ATP1A3P13637 1013 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 KRT5P13647 590 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 SYMPKQ92797 1274 aaKnown RBP21.56■■□□□ 1.04
SHANK1-203ENST00000391813 VPS37BQ9H9H4 285 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 TRAPPC10P48553 1259 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 CTDSPL2Q05D32 466 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 MFSD14BQ5SR56 506 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 SMC1BQ8NDV3 1235 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 SAAL1Q96ER3 474 aa21.56■■□□□ 1.04
SHANK1-203ENST00000391813 FGAP02671 866 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 SKIP12755 728 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 ITIH3Q06033 890 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 CCDC144BQ3MJ40 725 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 ARHGAP27Q6ZUM4 889 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 DNM3Q9UQ16 869 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 GTF2IP78347 998 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 ANKRD13CQ8N6S4 541 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 ZCCHC17Q9NP64 241 aaKnown RBP21.55■■□□□ 1.04
SHANK1-203ENST00000391813 COPRSQ9NQ92 184 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 PASKQ96RG2 1323 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 GMNNO75496 209 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 PLS1Q14651 629 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 TAF11Q15544 211 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 FAM182BQ5T319 152 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 TCHPQ9BT92 498 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 THEGQ9P2T0 379 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 ARMCX3Q9UH62 379 aaPredicted RBP21.55■■□□□ 1.04
SHANK1-203ENST00000391813 XDHP47989 1333 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 TXLNGQ9NUQ3 528 aa21.55■■□□□ 1.04
SHANK1-203ENST00000391813 A0A087WWV3 80 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 MFAP3LO75121 409 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 MYL1P05976 194 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 SEPT2Q15019 361 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 NELFCDQ8IXH7 590 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 CFAP61Q8NHU2 1237 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 RILPQ96NA2 401 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 SPZ1Q9BXG8 430 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 PFDN1O60925 122 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 SLC27A3Q5K4L6 730 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 GALNT17Q6IS24 598 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 GPIHBP1Q8IV16 184 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 PGRMC1O00264 195 aaKnown RBP21.54■■□□□ 1.04
SHANK1-203ENST00000391813 THAP12O43422 761 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 PHBP35232 272 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 LRRC8CQ8TDW0 803 aa21.54■■□□□ 1.04
SHANK1-203ENST00000391813 ANO9A1A5B4 782 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 IFNAR2P48551 515 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 RASSF7Q02833 373 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 CNOT6LQ96LI5 555 aaKnown RBP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 LAMC1P11047 1609 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 CYP27B1O15528 508 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 TADA3O75528 432 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 BLIDQ8IZY5 108 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 FTOQ9C0B1 505 aaKnown RBP eCLIP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 METTL14Q9HCE5 456 aaKnown RBP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 KDM3AQ9Y4C1 1321 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 PRDM1O75626 825 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 NCAPH2Q6IBW4 605 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 DDX27Q96GQ7 796 aaKnown RBP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 HINFPQ9BQA5 517 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 RWDD2AQ9UIY3 292 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 PPP1R9AQ9ULJ8 1098 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 DAAM1Q9Y4D1 1078 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 SETBP1Q9Y6X0 1596 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 POLR2FP61218 127 aaKnown RBP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 C2orf54Q08AI8 447 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 REXO1Q8N1G1 1221 aaKnown RBP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 RIC8AQ9NPQ8 531 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 SAMSN1Q9NSI8 373 aaKnown RBP21.53■■□□□ 1.04
SHANK1-203ENST00000391813 CEP152O94986 1710 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 CRB1P82279 1406 aa21.53■■□□□ 1.04
SHANK1-203ENST00000391813 ANKRD65E5RJM6 399 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 SESN3P58005 492 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 PTGDRQ13258 359 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 LRRC23Q53EV4 343 aaPredicted RBP21.52■■□□□ 1.04
SHANK1-203ENST00000391813 DCAF15Q66K64 600 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 FBXO41Q8TF61 875 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 PBKQ96KB5 322 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 FNBP1Q96RU3 617 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 ADCY7P51828 1080 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 ZMYM1Q5SVZ6 1142 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 CUL1Q13616 776 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 SAP30BPQ9UHR5 308 aaKnown RBP21.52■■□□□ 1.04
SHANK1-203ENST00000391813 EXOC7Q9UPT5 735 aa21.52■■□□□ 1.04
SHANK1-203ENST00000391813 EXOC3O60645 756 aa21.52■■□□□ 1.03
SHANK1-203ENST00000391813 HSPA6P17066 643 aa21.52■■□□□ 1.03
SHANK1-203ENST00000391813 COG7P83436 770 aa21.52■■□□□ 1.03
SHANK1-203ENST00000391813 VPS72Q15906 364 aa21.52■■□□□ 1.03
SHANK1-203ENST00000391813 ARHGEF18Q6ZSZ5 1173 aa21.52■■□□□ 1.03
SHANK1-203ENST00000391813 ATP2A3Q93084 1043 aa21.52■■□□□ 1.03
SHANK1-203ENST00000391813 CPSF1Q10570 1443 aaKnown RBP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 MED23Q9ULK4 1368 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 TUBB6Q9BUF5 446 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 BEGAINQ9BUH8 593 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 CIAO1O76071 339 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 BAG2O95816 211 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 AFAP1L2Q8N4X5 818 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms