RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FAM83BQ5T0W9 1011 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 TDRD7Q8NHU6 1098 aaKnown RBP19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 NAPGQ99747 312 aaPredicted RBP19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 LSM14BQ9BX40 385 aaKnown RBP19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 EPB41L4AQ9HCS5 686 aaPredicted RBP19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 CD19P15391 556 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 DEFB132Q7Z7B7 95 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 SGMS1Q86VZ5 419 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 ANKRD13CQ8N6S4 541 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 PRPHP41219 470 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 DNM2P50570 870 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 RFX7Q2KHR2 1363 aa19.87■□□□□ 0.77
PTPDC1-202ENST00000375360 PPP2R3AQ06190 1150 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 GSTA5Q7RTV2 222 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 LRRC8AQ8IWT6 810 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 TIGD1Q96MW7 591 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 PYCARDQ9ULZ3 195 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 ARHGEF28Q8N1W1 1705 aaKnown RBP19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 PTPREP23469 700 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 IGBP1P78318 339 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 SFMBT2Q5VUG0 894 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 LAD1O00515 517 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 DLATP10515 647 aaKnown RBP19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 GTF2F1P35269 517 aaKnown RBP eCLIP19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 SEPT14Q6ZU15 432 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 KRT26Q7Z3Y9 468 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 CRAMP1Q96RY5 1269 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 TUBGCP2Q9BSJ2 902 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 ANO3Q9BYT9 981 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 TMEM260Q9NX78 707 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 LRRIQ4A6NIV6 560 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 LMAN1P49257 510 aa19.86■□□□□ 0.77
PTPDC1-202ENST00000375360 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 SPP2Q13103 211 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 TXNRD3Q86VQ6 643 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 AK8Q96MA6 479 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 POTEMA6NI47 508 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 IFIH1Q9BYX4 1025 aaKnown RBP19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 STX10O60499 249 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 FBXO33Q7Z6M2 555 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 IGDCC4Q8TDY8 1250 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 SECISBP2LQ93073 1101 aaKnown RBP19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 PLEKHA4Q9H4M7 779 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 CTTNBP2NLQ9P2B4 639 aa19.85■□□□□ 0.77
PTPDC1-202ENST00000375360 GCFC2P16383 781 aaKnown RBP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 ABCB4P21439 1286 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 COPB1P53618 953 aaKnown RBP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 POLR2FP61218 127 aaKnown RBP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 R3HDM1Q15032 1099 aaKnown RBP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 SRBD1Q8N5C6 995 aaKnown RBP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 NEDD1Q8NHV4 660 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 ZHX2Q9Y6X8 837 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 CASP14P31944 242 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 KCTD2Q14681 263 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 CCDC25Q86WR0 208 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 PAGE5Q96GU1 130 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 CNOT6LQ96LI5 555 aaKnown RBP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 GOLPH3LQ9H4A5 285 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 ANTXR2P58335 489 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 CACTINQ8WUQ7 758 aaKnown RBP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 ITSN1Q15811 1721 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 CLIC2O15247 247 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 U2AF2P26368 475 aaKnown RBP eCLIP19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 KIFAP3Q92845 792 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 WRNIP1Q96S55 665 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 CNTNAP4Q9C0A0 1308 aa19.84■□□□□ 0.77
PTPDC1-202ENST00000375360 ZBTB5O15062 677 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 TLDC2A0PJX2 215 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 FAM205CA6NFA0 338 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 NR2F2P24468 414 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 GRIPAP1Q4V328 841 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 TTBK2Q6IQ55 1244 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 PLEKHG2Q9H7P9 1386 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 GDAQ9Y2T3 454 aa19.83■□□□□ 0.77
PTPDC1-202ENST00000375360 PP2D1A8MPX8 630 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 HSF2BPO75031 334 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 ERCC5P28715 1186 aaPredicted RBP19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 USP14P54578 494 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 FAM47CQ5HY64 1035 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 ARMCX5Q6P1M9 558 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 MYO1AQ9UBC5 1043 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 SMIM23A6NLE4 172 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 SFI1A8K8P3 1242 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 NOX5Q96PH1 765 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 TRERF1Q96PN7 1200 aa19.83■□□□□ 0.76
PTPDC1-202ENST00000375360 PXDNLA1KZ92 1463 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 LIG4P49917 911 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 POLGP54098 1239 aaPredicted RBP19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 DNAJC21Q5F1R6 531 aaKnown RBP19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 TSGA10Q9BZW7 698 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 BHMT2Q9H2M3 363 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 IGSF3O75054 1194 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 ZNF354CQ86Y25 554 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 ORC4O43929 436 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 GYS1P13807 737 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 STAT1P42224 750 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 CTTNQ14247 550 aaKnown RBP19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 ELF2Q15723 593 aa19.82■□□□□ 0.76
PTPDC1-202ENST00000375360 TRIM31Q9BZY9 425 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms