RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ANKS1AQ92625 1134 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 TNFRSF25Q93038 417 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 PMEPA1Q969W9 287 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 MRS2Q9HD23 443 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 GGA1Q9UJY5 639 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 LZTS1Q9Y250 596 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 AKAP2Q9Y2D5 859 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 PTCH2Q9Y6C5 1203 aa4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 COL11A2P13942 1736 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-205ENST00000368295 NEURL1BA8MQ27 555 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ADARB2-AS1A8MUL3 147 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 C1QTNF9BB2RNN3 333 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 RPS6KA4O75676 772 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 SERPINB2P05120 415 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 MYL1P05976 194 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 SCP2P22307 547 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ADH7P40394 386 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 PLCB3Q01970 1234 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 HYAL2Q12891 473 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 MAP3K11Q16584 847 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 NBPF9Q3BBW0 867 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 MCTP1Q6DN14 999 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 UBE2Q1Q7Z7E8 422 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 TDHQ8IZJ6 230 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 TEX19Q8NA77 164 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ACDQ96AP0 544 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 NEUROD6Q96NK8 337 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 NIF3L1Q9GZT8 377 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 DNAJC25Q9H1X3 360 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 DNAJB12Q9NXW2 375 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 FOXD3Q9UJU5 478 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 SYNPO2Q9UMS6 1093 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 INPP5FQ9Y2H2 1132 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 NCOR2Q9Y618 2525 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 AFDNP55196 1824 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ELOA3CA0A087WX78 387 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ELOA3DA6NLF2 546 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 CPNE3O75131 537 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 IGHA2P01877 340 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 FOSL2P15408 326 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 MAGEA10P43363 369 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 TNNI2P48788 182 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ATP2B2Q01814 1243 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 DSC3Q14574 896 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 CDC37Q16543 378 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 TMEM95Q3KNT9 176 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ELOA3BQ3SY89 546 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 SLC9C1Q4G0N8 1177 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ARSHQ5FYA8 562 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 FCHSD1Q86WN1 690 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 LSM14AQ8ND56 463 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ELOA3Q8NG57 546 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 TTC14Q96N46 770 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 FMNL2Q96PY5 1086 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ARPC5LQ9BPX5 153 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 SRRTQ9BXP5 876 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 ZFYVE28Q9HCC9 887 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 CWC25Q9NXE8 425 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 KLF15Q9UIH9 416 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 SLC6A14Q9UN76 642 aa4.25□□□□□ -1.73
ECHDC1-205ENST00000368295 DCHS1Q96JQ0 3298 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CYSRT1A8MQ03 144 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 TBX3O15119 743 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 FAM163BP0C2L3 166 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 ALAS2P22557 587 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CES1P23141 567 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 COL8A1P27658 744 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 IARSP41252 1262 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 TRAPPC10P48553 1259 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CKAP2LQ8IYA6 745 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CHPFQ8IZ52 775 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 C2orf69Q8N8R5 385 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CCDC89Q8N998 374 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 C1orf127Q8N9H9 656 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 RNPC3Q96LT9 517 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 HTATIP2Q9BUP3 242 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CHRDQ9H2X0 955 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 IGFLR1Q9H665 355 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 ARNT2Q9HBZ2 717 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 HOMER2Q9NSB8 354 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CNTN3Q9P232 1028 aa4.24□□□□□ -1.73
ECHDC1-205ENST00000368295 CYP27B1O15528 508 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 OIP5O43482 229 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 EPXP11678 715 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 BMP8BP34820 402 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ORC1Q13415 861 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 PPP4R4Q6NUP7 873 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 CDC37L1Q7L3B6 337 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 MCF2L2Q86YR7 1114 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 WDR75Q8IWA0 830 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 C7orf61Q8IZ16 206 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 STK11IPQ8N1F8 1099 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 KCNH5Q8NCM2 988 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 FBXL18Q96ME1 805 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 RBSNQ9H1K0 784 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 TTYH1Q9H313 450 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 RETREG1Q9H6L5 497 aa4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ADARB2Q9NS39 739 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-205ENST00000368295 ATG3Q9NT62 314 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms