RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ATP10BO94823 1461 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 C2orf71A6NGG8 1288 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 H3BS24 57 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 GSC2O15499 205 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 PDE8AO60658 829 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 DNAJC8O75937 253 aaPredicted RBP7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 THBDP07204 575 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 VAV1P15498 845 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 NOP2P46087 812 aaKnown RBP7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 BRAPQ7Z569 592 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 FBXO41Q8TF61 875 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 GPRC5CQ9NQ84 441 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 INTS7Q9NVH2 962 aaKnown RBP7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 ZSWIM5Q9P217 1185 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 MAGEC2Q9UBF1 373 aaPredicted RBP7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 RNF112Q9ULX5 631 aa7.83□□□□□ -1.16
RNU4-39P-201ENST00000362455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 EFCAB14O75071 495 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 ZNF205O95201 554 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 SYPP08247 313 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 TPP2P29144 1249 aaPredicted RBP7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 CNGA1P29973 690 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 STAT3P40763 770 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 CLCN7P51798 805 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 CPSF6Q16630 551 aaKnown RBP eCLIP7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 MAMDC2Q7Z304 686 aaPredicted RBP7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 FGD2Q7Z6J4 655 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 LRRTM3Q86VH5 581 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 PPIL6Q8IXY8 311 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 USHBP1Q8N6Y0 703 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 NPLOC4Q8TAT6 608 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 FRS2Q8WU20 508 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 CHAC2Q8WUX2 184 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 UBE2FQ969M7 185 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 TARS2Q9BW92 718 aaKnown RBP7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 TRAF6Q9Y4K3 522 aa7.82□□□□□ -1.16
RNU4-39P-201ENST00000362455 PRXQ9BXM0 1461 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 GSG1L2A8MUP6 293 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 SEPHS1P49903 392 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 PCBP3P57721 371 aaKnown RBP7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 GAB4Q2WGN9 574 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 RTP2Q5QGT7 225 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 STYK1Q6J9G0 422 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 CNNM4Q6P4Q7 775 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 THAP5Q7Z6K1 395 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 PLD6Q8N2A8 252 aaKnown RBP7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 LINC00116Q8NCU8 138 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 DCAF4Q8WV16 495 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 SCLYQ96I15 445 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 CAAP1Q9H8G2 361 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 TCFL5Q9UL49 500 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 ARAP3Q8WWN8 1544 aa7.81□□□□□ -1.16
RNU4-39P-201ENST00000362455 CYP26A1O43174 497 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 GSTM1P09488 218 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 CDK11BP21127 795 aaKnown RBP7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 IFI16Q16666 785 aaKnown RBP7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 RSPO4Q2I0M5 234 aaPredicted RBP7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 NKAPLQ5M9Q1 402 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 ACBD5Q5T8D3 534 aaPredicted RBP7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 RCSD1Q6JBY9 416 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 KCNT2Q6UVM3 1135 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 RNF180Q86T96 592 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 RPUSD2Q8IZ73 545 aaKnown RBP7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 UBR7Q8N806 425 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 FOXP3Q9BZS1 431 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 SEMA3GQ9NS98 782 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 DUSP13Q9UII6 198 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 TMEFF2Q9UIK5 374 aaPredicted RBP7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 TNPO3Q9Y5L0 923 aaKnown RBP7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 PTPRMP28827 1452 aa7.8□□□□□ -1.16
RNU4-39P-201ENST00000362455 SSU72P8A0A1W2PR75 194 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 ARNTLO00327 626 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 MEFVO15553 781 aaPredicted RBP7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 FKTNO75072 461 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 RASGRP1O95267 797 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 PLS3P13797 630 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 SOX5P35711 763 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 EEF1DP3Q658K8 133 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 ZDHHC13Q8IUH4 622 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 KSR1Q8IVT5 923 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 NETO1Q8TDF5 533 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 DDX1Q92499 740 aaKnown RBP7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 PHF20Q9BVI0 1012 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 FAM126AQ9BYI3 521 aaPredicted RBP7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 CLEC1BQ9P126 229 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 MAPRE3Q9UPY8 281 aa7.79□□□□□ -1.16
RNU4-39P-201ENST00000362455 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 FAM83GA6ND36 823 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 AQP7O14520 342 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 OPA1O60313 960 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 RAB11FIP3O75154 756 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 ASLP04424 464 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 POU3F3P20264 500 aaPredicted RBP7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 LTKP29376 864 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 ZNF460Q14592 562 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 TESK1Q15569 626 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 CT47A1Q5JQC4 288 aaPredicted RBP7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 SLC51AQ86UW1 340 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 CCDC103Q8IW40 242 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms