RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 LRRC1Q9BTT6 524 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 CEP152O94986 1710 aa17.54■□□□□ 0.4
CLSTN1-201ENST00000361311 MROH7-TTC4A0A0A0MT08 1334 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 POLD4Q9HCU8 107 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 NOP53Q9NZM5 478 aaKnown RBP17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 ADGRL3Q9HAR2 1447 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 NEO1Q92859 1461 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 ELF1P32519 619 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 CIB2O75838 187 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 KRT15P19012 456 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 MAGEF1Q9HAY2 307 aa17.53■□□□□ 0.4
CLSTN1-201ENST00000361311 ZNF185O15231 689 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 CALUO43852 315 aaPredicted RBP17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 TFAP4Q01664 338 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 REXO1Q8N1G1 1221 aaKnown RBP17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 CUEDC2Q9H467 287 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 HDAC9Q9UKV0 1011 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 FRMD4BQ9Y2L6 1034 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 ATP6V1G3Q96LB4 118 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 TRIM10Q9UDY6 481 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 DAAM1Q9Y4D1 1078 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 ABCC12Q96J65 1359 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 PRCPP42785 496 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 MRPL12P52815 198 aaKnown RBP17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 SESN3P58005 492 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 TAF11Q15544 211 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 TBC1D10CQ8IV04 446 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 HVCN1Q96D96 273 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 SAAL1Q96ER3 474 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 NDST4Q9H3R1 872 aa17.52■□□□□ 0.4
CLSTN1-201ENST00000361311 MROH5Q6ZUA9 1318 aa17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 ZNF609O15014 1411 aa17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 LRRIQ3A6PVS8 624 aaPredicted RBP17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 PLTPP55058 493 aa17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 MYO1EQ12965 1108 aa17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 NCAPHQ15003 741 aa17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 SPATA24Q86W54 205 aa17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 RASGRP4Q8TDF6 673 aa17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 SMCR8Q8TEV9 937 aaPredicted RBP17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 ARMCX3Q9UH62 379 aaPredicted RBP17.52■□□□□ 0.39
CLSTN1-201ENST00000361311 MYL1P05976 194 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 XRCC5P13010 732 aaKnown RBP17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 CUL1Q13616 776 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 UBN2Q6ZU65 1347 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 VIRMAQ69YN4 1812 aaKnown RBP17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 PHKG2P15735 406 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 BIRC3Q13489 604 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 TEX11Q8IYF3 940 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 OXER1Q8TDS5 423 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 FAM212AQ96EL1 285 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 STK36Q9NRP7 1315 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 DDAH1O94760 285 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 PACS2Q86VP3 889 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 CCHCR1Q8TD31 782 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 CCT8L2Q96SF2 557 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 ELAC2Q9BQ52 826 aaKnown RBP17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 TPX2Q9ULW0 747 aaKnown RBP17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 MYO1FO00160 1098 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 ARHGAP24Q8N264 748 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 EPN3Q9H201 632 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
CLSTN1-201ENST00000361311 PDE8BO95263 885 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 FAM26FQ5R3K3 315 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 PBKQ96KB5 322 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 NCK2O43639 380 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 DESP17661 470 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 PLS1Q14651 629 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 UIMC1Q96RL1 719 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 AP1M1Q9BXS5 423 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 TRIM4Q9C037 500 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 PRKAB2O43741 272 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 GYPCP04921 128 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 SLMAPQ14BN4 828 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 ANKRD20A3Q5VUR7 823 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 ZNF473Q8WTR7 871 aaKnown RBP17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 FMO2Q99518 471 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 FBXO2Q9UK22 296 aaPredicted RBP17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 SNX12Q9UMY4 172 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 PCDHB13Q9Y5F0 798 aa17.5■□□□□ 0.39
CLSTN1-201ENST00000361311 STAMBPO95630 424 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 EIF3BP55884 814 aaKnown RBP17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 WDR93Q6P2C0 686 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 ANKZF1Q9H8Y5 726 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 LMTK3Q96Q04 1460 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 GAS8O95995 478 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 UAP1Q16222 522 aaPredicted RBP17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 HAUS3Q68CZ6 603 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 CEP128Q6ZU80 1094 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 ADAMTS1Q9UHI8 967 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 SPDYE3A6NKU9 549 aa17.49■□□□□ 0.39
CLSTN1-201ENST00000361311 SLCO1A2P46721 670 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms