RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 PPP1R11O60927 126 aaPredicted RBP23.49■■□□□ 1.35
HCFC1R1-202ENST00000354679 KRT32Q14532 448 aa23.49■■□□□ 1.35
HCFC1R1-202ENST00000354679 DNERQ8NFT8 737 aa23.49■■□□□ 1.35
HCFC1R1-202ENST00000354679 TBC1D5Q92609 795 aa23.49■■□□□ 1.35
HCFC1R1-202ENST00000354679 FERMT2Q96AC1 680 aa23.49■■□□□ 1.35
HCFC1R1-202ENST00000354679 ZMYND8Q9ULU4 1186 aaPredicted RBP23.49■■□□□ 1.35
HCFC1R1-202ENST00000354679 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 KIF5BP33176 963 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 TNFAIP2Q03169 654 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 ADCK5Q3MIX3 580 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 CHRDL2Q6WN34 429 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 KLHDC9Q8NEP7 349 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 MPHOSPH6Q99547 160 aaKnown RBP23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 SPC25Q9HBM1 224 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 PDGFCQ9NRA1 345 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 PCDHA1Q9Y5I3 950 aa23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 BAZ2BQ9UIF8 2168 aaKnown RBP23.48■■□□□ 1.35
HCFC1R1-202ENST00000354679 RANBP2P49792 3224 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 REC8O95072 547 aa23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 C6orf222P0C671 652 aaPredicted RBP23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 GJA9P57773 515 aa23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 TAPT1Q6NXT6 567 aa23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 SLC39A5Q6ZMH5 540 aa23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 NOL8Q76FK4 1167 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 SYTL5Q8TDW5 730 aaPredicted RBP23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 TSEN34Q9BSV6 310 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 UPF3AQ9H1J1 476 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 COLQQ9Y215 455 aaPredicted RBP23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 SLC12A7Q9Y666 1083 aa23.47■■□□□ 1.35
HCFC1R1-202ENST00000354679 MYADML2A6NDP7 307 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 CALM1P0DP23 149 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 CALM2P0DP24 149 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 CALM3P0DP25 149 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 EDNRBP24530 442 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 CST5P28325 142 aaPredicted RBP23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 RTP1P59025 263 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 EXOSC10Q01780 885 aaKnown RBP23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 PDE4DQ08499 809 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 TRAF1Q13077 416 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 IQSEC1Q6DN90 963 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 DHX32Q7L7V1 743 aaKnown RBP23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 SGMS1Q86VZ5 419 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 KCNB2Q92953 911 aa23.46■■□□□ 1.35
HCFC1R1-202ENST00000354679 PNMA6FA0A0J9YX94 578 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 A0A1W2PQ45 241 aaPredicted RBP23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 A0A1W2PQY0 241 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 MOXD2PA6NHM9 499 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 B4DLN1 442 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 SMPD1P17405 629 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 SYN1P17600 705 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 RXRAP19793 462 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 HSPA4P34932 840 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 GNAQP50148 359 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 MRPL12P52815 198 aaKnown RBP23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 CCSAPQ6IQ19 270 aaPredicted RBP23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 TCEANC2Q96MN5 208 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 TAAR1Q96RJ0 339 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 LZTS2Q9BRK4 669 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 SPZ1Q9BXG8 430 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 COL20A1Q9P218 1284 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 GNEQ9Y223 722 aaKnown RBP23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 ATP11BQ9Y2G3 1177 aa23.45■■□□□ 1.34
HCFC1R1-202ENST00000354679 OPLAHO14841 1288 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 CFBP00751 764 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 HMGB1P09429 215 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 ACLYP53396 1101 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 IRX5P78411 483 aaPredicted RBP23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 SNX17Q15036 470 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 KCNA10Q16322 511 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 TLK2Q86UE8 772 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 RAB11FIP4Q86YS3 637 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 PCSK9Q8NBP7 692 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 PIBF1Q8WXW3 757 aa23.44■■□□□ 1.34
HCFC1R1-202ENST00000354679 PLEKHA8P1O95397 391 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 SMARCA1P28370 1054 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 HSD17B4P51659 736 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 GHRHRQ02643 423 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 HABP4Q5JVS0 413 aaKnown RBP23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 GNASQ5JWF2 1037 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 SYNE3Q6ZMZ3 975 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 MICU3Q86XE3 530 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 NSUN6Q8TEA1 469 aaKnown RBP23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 RRP36Q96EU6 259 aaKnown RBP23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 RMDN3Q96TC7 470 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 SNX14Q9Y5W7 946 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 TRIOBPQ9H2D6 2365 aa23.43■■□□□ 1.34
HCFC1R1-202ENST00000354679 RBM47A0AV96 593 aaKnown RBP23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 CTAGE5O15320 804 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 DYNC1LI2O43237 492 aaPredicted RBP23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 PTGS1P23219 599 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 NKX3-2P78367 333 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 TRIM60Q495X7 471 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 DUSP28Q4G0W2 176 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 TMEM63BQ5T3F8 832 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 C1orf53Q5VUE5 145 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 SRBD1Q8N5C6 995 aaKnown RBP23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 WDR11Q9BZH6 1224 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 AP5M1Q9H0R1 490 aa23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 MAP3K20Q9NYL2 800 aaKnown RBP23.42■■□□□ 1.34
HCFC1R1-202ENST00000354679 ASGR1P07306 291 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms