RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 NONOQ15233 471 aaKnown RBP eCLIP16.74■□□□□ 0.27
CXCL12-201ENST00000343575 CPXCR1Q8N123 301 aa16.74■□□□□ 0.27
CXCL12-201ENST00000343575 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
CXCL12-201ENST00000343575 CLEC4DQ8WXI8 215 aa16.74■□□□□ 0.27
CXCL12-201ENST00000343575 GPBP1L1Q9HC44 474 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-201ENST00000343575 ZNF214Q9UL59 606 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-201ENST00000343575 GADL1Q6ZQY3 521 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 C4orf32Q8N8J7 132 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 KCNG4Q8TDN1 519 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 RIPK3Q9Y572 518 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 MYPNQ86TC9 1320 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 PIK3CDO00329 1044 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 PEX10O60683 326 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 PPP6R2O75170 966 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 HOXA13P31271 388 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-201ENST00000343575 ME1P48163 572 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 GRIN1Q05586 938 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 TMEM132BQ14DG7 1078 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 CRYGNQ8WXF5 182 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 AGTPBP1Q9UPW5 1226 aa16.73■□□□□ 0.27
CXCL12-201ENST00000343575 MORC2Q9Y6X9 1032 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-201ENST00000343575 ABCB11O95342 1321 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 MYH7BA7E2Y1 1941 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 NFIBO00712 420 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 ZBED4O75132 1171 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 FDX1P10109 184 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 LIG1P18858 919 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 ADALQ6DHV7 355 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 GLT8D2Q9H1C3 349 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 GOLPH3LQ9H4A5 285 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 HOXC10Q9NYD6 342 aa16.72■□□□□ 0.27
CXCL12-201ENST00000343575 FBXO2Q9UK22 296 aaPredicted RBP16.72■□□□□ 0.27
CXCL12-201ENST00000343575 MRPL11Q9Y3B7 192 aaKnown RBP16.72■□□□□ 0.27
CXCL12-201ENST00000343575 UQCRHLA0A096LP55 91 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 ATP2A1O14983 1001 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 UQCRHP07919 91 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 PTPREP23469 700 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 MCM7P33993 719 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 ATP2C1P98194 919 aaPredicted RBP16.71■□□□□ 0.27
CXCL12-201ENST00000343575 TRAF1Q13077 416 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 PTGDRQ13258 359 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 SNAPC2Q13487 334 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 NEK8Q86SG6 692 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 CLIC6Q96NY7 704 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
CXCL12-201ENST00000343575 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.71■□□□□ 0.27
CXCL12-201ENST00000343575 GHRHRQ02643 423 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 UVSSAQ2YD98 709 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 LBX2Q6XYB7 198 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 ANO3Q9BYT9 981 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 TMEM60Q9H2L4 133 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 TMEM63CQ9P1W3 806 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 A0A0G2JMZ2 1700 aa16.71■□□□□ 0.27
CXCL12-201ENST00000343575 CFBP00751 764 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 ALAS1P13196 640 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 HSD17B4P51659 736 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
CXCL12-201ENST00000343575 AP3B2Q13367 1082 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 IL17AQ16552 155 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 LETM2Q2VYF4 491 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 SHC4Q6S5L8 630 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
CXCL12-201ENST00000343575 SMAP1Q8IYB5 467 aaPredicted RBP16.7■□□□□ 0.26
CXCL12-201ENST00000343575 BTBD7Q9P203 1132 aa16.7■□□□□ 0.26
CXCL12-201ENST00000343575 A0A1W2PQ27 194 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 A0A1W2PQ64 194 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 A0A1W2PQD8 194 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 OAZ1P54368 228 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 HUNKP57058 714 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 SAPCD2Q86UD0 394 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 BRI3BPQ8WY22 251 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 HOMER2Q9NSB8 354 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 COL20A1Q9P218 1284 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 SRPRBQ9Y5M8 271 aaKnown RBP16.69■□□□□ 0.26
CXCL12-201ENST00000343575 CNMDO75829 334 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 TDP2O95551 362 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 SNW1Q13573 536 aaKnown RBP16.69■□□□□ 0.26
CXCL12-201ENST00000343575 SNRNP48Q6IEG0 339 aaKnown RBP16.69■□□□□ 0.26
CXCL12-201ENST00000343575 TEX2Q8IWB9 1127 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 ENGASEQ8NFI3 743 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 TRERF1Q96PN7 1200 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 CEP131Q9UPN4 1083 aa16.69■□□□□ 0.26
CXCL12-201ENST00000343575 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
CXCL12-201ENST00000343575 CCNT1O60563 726 aaKnown RBP16.68■□□□□ 0.26
CXCL12-201ENST00000343575 POLR2MP0CAP2 368 aa16.68■□□□□ 0.26
CXCL12-201ENST00000343575 HERVK_113P62684 666 aa16.68■□□□□ 0.26
CXCL12-201ENST00000343575 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
CXCL12-201ENST00000343575 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
CXCL12-201ENST00000343575 R3HDMLQ9H3Y0 253 aa16.68■□□□□ 0.26
CXCL12-201ENST00000343575 TSPY26PQ9H489 355 aa16.68■□□□□ 0.26
CXCL12-201ENST00000343575 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 SLC37A4O43826 429 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 CUTAO60888 179 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 NR1I2O75469 434 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 BMP15O95972 392 aa16.67■□□□□ 0.26
CXCL12-201ENST00000343575 FOSP01100 380 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms