RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 SFPQP23246 707 aaKnown RBP eCLIP17.42■□□□□ 0.38
MBD1-203ENST00000339998 HAS1Q92839 578 aa17.42■□□□□ 0.38
MBD1-203ENST00000339998 CCSER1Q9C0I3 900 aa17.42■□□□□ 0.38
MBD1-203ENST00000339998 LRWD1Q9UFC0 647 aa17.42■□□□□ 0.38
MBD1-203ENST00000339998 DACH1Q9UI36 760 aa17.42■□□□□ 0.38
MBD1-203ENST00000339998 PSDA5PKW4 1024 aaPredicted RBP17.41■□□□□ 0.38
MBD1-203ENST00000339998 KLRC4O43908 158 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 FCER1AP12319 257 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 RASSF7Q02833 373 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 SPDYE2Q495Y8 402 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 FAM83BQ5T0W9 1011 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 APTXQ7Z2E3 356 aaKnown RBP17.41■□□□□ 0.38
MBD1-203ENST00000339998 CPLX3Q8WVH0 158 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 ZNF592Q92610 1267 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 NFKBIEO00221 500 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 BMP3P12645 472 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 ERCC5P28715 1186 aaPredicted RBP17.41■□□□□ 0.38
MBD1-203ENST00000339998 PRPHP41219 470 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 NELFBQ8WX92 580 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 KBTBD4Q9NVX7 518 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 DDX25Q9UHL0 483 aaKnown RBP17.41■□□□□ 0.38
MBD1-203ENST00000339998 PCNTO95613 3336 aa17.41■□□□□ 0.38
MBD1-203ENST00000339998 MEIS2O14770 477 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 MRPL12P52815 198 aaKnown RBP17.4■□□□□ 0.38
MBD1-203ENST00000339998 GRB10Q13322 594 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 MCM6Q14566 821 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 SPATA1Q5VX52 437 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 SAMD7Q7Z3H4 446 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 DCAF4Q8WV16 495 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 FAM151AQ8WW52 585 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 STAT3P40763 770 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 PRELPP51888 382 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
MBD1-203ENST00000339998 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 PNMA5Q96PV4 448 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 NKRFO15226 690 aaKnown RBP eCLIP17.4■□□□□ 0.38
MBD1-203ENST00000339998 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
MBD1-203ENST00000339998 SYDE2Q5VT97 1194 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 PRAMEF18Q5VWM3 479 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 CYP2W1Q8TAV3 490 aa17.4■□□□□ 0.38
MBD1-203ENST00000339998 LAD1O00515 517 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 OPLAHO14841 1288 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 MARCH6O60337 910 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 UBXN2AP68543 259 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 STK4Q13043 487 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 ZNF658Q5TYW1 1059 aaPredicted RBP17.39■□□□□ 0.37
MBD1-203ENST00000339998 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.37
MBD1-203ENST00000339998 VPS16Q9H269 839 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 TAOK3Q9H2K8 898 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 ZBTB21Q9ULJ3 1066 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 PRR12Q9ULL5 1215 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 TNNT1P13805 278 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 ASIC1P78348 528 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 FCHSD1Q86WN1 690 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 ANO3Q9BYT9 981 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 IMPACTQ9P2X3 320 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 GJA3Q9Y6H8 435 aa17.39■□□□□ 0.37
MBD1-203ENST00000339998 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 ERCC3P19447 782 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 GSDMDP57764 484 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 RBM10P98175 930 aaKnown RBP17.38■□□□□ 0.37
MBD1-203ENST00000339998 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
MBD1-203ENST00000339998 SNX29Q8TEQ0 813 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 SLC16A10Q8TF71 515 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 TRIM9Q9C026 710 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 PAK1Q13153 545 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 CIAPIN1Q6FI81 312 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 GLIS3Q8NEA6 775 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 TAB2Q9NYJ8 693 aa17.38■□□□□ 0.37
MBD1-203ENST00000339998 RAD51AP2Q09MP3 1159 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 NR1I3Q14994 352 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 TBC1D10BQ4KMP7 808 aaPredicted RBP17.37■□□□□ 0.37
MBD1-203ENST00000339998 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 CACNB1Q02641 598 aaPredicted RBP17.37■□□□□ 0.37
MBD1-203ENST00000339998 PDE4DQ08499 809 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 RASA3Q14644 834 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 CDKAL1Q5VV42 579 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 AMNQ9BXJ7 453 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 POLD4Q9HCU8 107 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 SLC39A2Q9NP94 309 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 MYMKA6NI61 221 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 PRR16Q569H4 304 aa17.37■□□□□ 0.37
MBD1-203ENST00000339998 CCAR2Q8N163 923 aaKnown RBP17.37■□□□□ 0.37
MBD1-203ENST00000339998 HERC5Q9UII4 1024 aaKnown RBP17.37■□□□□ 0.37
MBD1-203ENST00000339998 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
MBD1-203ENST00000339998 KRT31Q15323 416 aa17.36■□□□□ 0.37
MBD1-203ENST00000339998 GMCL1Q96IK5 515 aa17.36■□□□□ 0.37
MBD1-203ENST00000339998 AK8Q96MA6 479 aa17.36■□□□□ 0.37
MBD1-203ENST00000339998 A0A1B0GTH6 734 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms