RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ATP5OP48047 213 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 ZNF513Q8N8E2 541 aaPredicted RBP16.15■□□□□ 0.18
SCN3B-201ENST00000299333 PANK4Q9NVE7 773 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 ADAM21Q9UKJ8 722 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 IRX1P78414 480 aaPredicted RBP16.15■□□□□ 0.18
SCN3B-201ENST00000299333 PDCLQ13371 301 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
SCN3B-201ENST00000299333 NME8Q8N427 588 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 ZNF594Q96JF6 807 aaPredicted RBP16.15■□□□□ 0.18
SCN3B-201ENST00000299333 GTPBP6O43824 516 aaPredicted RBP16.15■□□□□ 0.18
SCN3B-201ENST00000299333 MOCS3O95396 460 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 NCF2P19878 526 aaPredicted RBP16.15■□□□□ 0.18
SCN3B-201ENST00000299333 ITKQ08881 620 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 ACSBG1Q96GR2 724 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 A0A087WWV3 80 aa16.14■□□□□ 0.18
SCN3B-201ENST00000299333 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.18
SCN3B-201ENST00000299333 TOM1L1O75674 476 aa16.14■□□□□ 0.18
SCN3B-201ENST00000299333 NEK2P51955 445 aa16.14■□□□□ 0.18
SCN3B-201ENST00000299333 CDR2Q01850 454 aa16.14■□□□□ 0.18
SCN3B-201ENST00000299333 LMNB2Q03252 620 aa16.14■□□□□ 0.18
SCN3B-201ENST00000299333 PPM1KQ8N3J5 372 aa16.14■□□□□ 0.18
SCN3B-201ENST00000299333 THOC1Q96FV9 657 aaKnown RBP16.14■□□□□ 0.18
SCN3B-201ENST00000299333 CNOT6LQ96LI5 555 aaKnown RBP16.14■□□□□ 0.18
SCN3B-201ENST00000299333 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
SCN3B-201ENST00000299333 FTCDO95954 541 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 PSPC1Q8WXF1 523 aaKnown RBP16.14■□□□□ 0.17
SCN3B-201ENST00000299333 ANKRD2Q9GZV1 360 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 HAUS2Q9NVX0 235 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
SCN3B-201ENST00000299333 ADAM9Q13443 819 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 MUM1L1Q5H9M0 696 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 MAML1Q92585 1016 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 CCDC124Q96CT7 223 aaKnown RBP16.14■□□□□ 0.17
SCN3B-201ENST00000299333 FGD4Q96M96 766 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 PGRMC1O00264 195 aaKnown RBP16.14■□□□□ 0.17
SCN3B-201ENST00000299333 ART3Q13508 389 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 PLCB4Q15147 1175 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 NBPF20Q3BBV1 942 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 NUGGCQ68CJ6 796 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 TUBGCP2Q9BSJ2 902 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 POLR3CQ9BUI4 534 aaPredicted RBP16.14■□□□□ 0.17
SCN3B-201ENST00000299333 CCDC68Q9H2F9 335 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 RASGRF2O14827 1237 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 SPAG7O75391 227 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 SLC12A1Q13621 1099 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 DPCR1Q3MIW9 517 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.14■□□□□ 0.17
SCN3B-201ENST00000299333 TRAIPQ9BWF2 469 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 ANAPC5Q9UJX4 755 aa16.14■□□□□ 0.17
SCN3B-201ENST00000299333 GSTA4O15217 222 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 GSPT1P15170 499 aaKnown RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 ITGA6P23229 1130 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 YWHAEP62258 255 aaKnown RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 HDLBPQ00341 1268 aaKnown RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 LLGL1Q15334 1064 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 ZYXQ15942 572 aaKnown RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 KDM3AQ9Y4C1 1321 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 S100BP04271 92 aaPredicted RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 PTH1RQ03431 593 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 FAM89AQ96GI7 184 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 TRPC5Q9UL62 973 aaPredicted RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 SMCO2A6NFE2 343 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 MAPK13O15264 365 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 KDM1AO60341 852 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 DNAJC6O75061 913 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 TRIM37O94972 964 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 SYMPKQ92797 1274 aaKnown RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 C1orf112Q9NSG2 853 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 SPTLC3Q9NUV7 552 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 CAPN11Q9UMQ6 739 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 MAP3K5Q99683 1374 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 YARSP54577 528 aaKnown RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 OCA2Q04671 838 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 IDI1Q13907 227 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
SCN3B-201ENST00000299333 SPC25Q9HBM1 224 aa16.13■□□□□ 0.17
SCN3B-201ENST00000299333 ECEL1O95672 775 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 MT-ND3P03897 115 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 LRRC59Q96AG4 307 aaKnown RBP16.12■□□□□ 0.17
SCN3B-201ENST00000299333 PCDHA5Q9Y5H7 936 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 KRT75O95678 551 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 MCF2P10911 925 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 SGO2Q562F6 1265 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 FAM47AQ5JRC9 791 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 SH2D4AQ9H788 454 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 LZTS1Q9Y250 596 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
SCN3B-201ENST00000299333 CFBP00751 764 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
SCN3B-201ENST00000299333 INSRP06213 1382 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 CFAP43Q8NDM7 1665 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 LMNAP02545 664 aaKnown RBP16.12■□□□□ 0.17
SCN3B-201ENST00000299333 SLC1A4P43007 532 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 EXOC3L4Q17RC7 722 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms