RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 NOC3LQ8WTT2 800 aaKnown RBP17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 DHTKD1Q96HY7 919 aaPredicted RBP17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 UBXN6Q9BZV1 441 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 TRAF5O00463 557 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 KCTD16Q68DU8 428 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 GPCPD1Q9NPB8 672 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 TMEM260Q9NX78 707 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 ZNF804BA4D1E1 1349 aa17.99■□□□□ 0.47
SNCAIP-202ENST00000261368 PSMD14O00487 310 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 GNA11P29992 359 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 TSG101Q99816 390 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 TMEM47Q9BQJ4 181 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 TRIM9Q9C026 710 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 SRGNP10124 158 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 CCT5P48643 541 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 AMPD2Q01433 879 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 TTI2Q6NXR4 508 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 C8orf74Q6P047 294 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 TMC4Q7Z404 712 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 NEK8Q86SG6 692 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 COG1Q8WTW3 980 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 PDE2AO00408 941 aaPredicted RBP17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 ATP1A2P50993 1020 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 KIF11P52732 1056 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 GIMAP8Q8ND71 665 aaPredicted RBP17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 TRIM58Q8NG06 486 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 PIGSQ96S52 555 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 EYA3Q99504 573 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 LRRC1Q9BTT6 524 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 HPCAL4Q9UM19 191 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 PCDHA13Q9Y5I0 950 aa17.98■□□□□ 0.47
SNCAIP-202ENST00000261368 PDS5AQ29RF7 1337 aaKnown RBP17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 A0A1W2PQC6 194 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 MYBL2P10244 700 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 VAV2P52735 878 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 HLTFQ14527 1009 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 REXO1Q8N1G1 1221 aaKnown RBP17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 COA7Q96BR5 231 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 DNAJC7Q99615 494 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 NUP188Q5SRE5 1749 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 HSF2BPO75031 334 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 CALCRLQ16602 461 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 KRT25Q7Z3Z0 450 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 CCDC155Q8N6L0 562 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 HDAC7Q8WUI4 952 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 COL18A1P39060 1754 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 SHTN1A0MZ66 631 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 POTEMA6NI47 508 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 RHOBTB3O94955 611 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 GUCY2FP51841 1108 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 TSGA10Q9BZW7 698 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 NDST4Q9H3R1 872 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 IL17RBQ9NRM6 502 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 PSD3Q9NYI0 1048 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 CAPN6Q9Y6Q1 641 aa17.97■□□□□ 0.47
SNCAIP-202ENST00000261368 H0YHG0 523 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 RAPGEF1Q13905 1077 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 KRT79Q5XKE5 535 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 TEX11Q8IYF3 940 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 DUSP9Q99956 384 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 MPHOSPH10O00566 681 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 NOP2P46087 812 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 TTC31Q49AM3 519 aaPredicted RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 BMP2KQ9NSY1 1161 aaPredicted RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 NID2Q14112 1375 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 BAZ2AQ9UIF9 1905 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 ESYT3A0FGR9 886 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 LRRC31Q6UY01 552 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 LRRC47Q8N1G4 583 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 GJA10Q969M2 543 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 RPGRIP1Q96KN7 1286 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 ANKRD2Q9GZV1 360 aa17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-202ENST00000261368 LRRC53A6NM62 1247 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 EIF3CLB5ME19 914 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 GNPATO15228 680 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 FGFR1OPO95684 399 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 GNGT1P63211 74 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 GFPT1Q06210 699 aaPredicted RBP17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 KCNB1Q14721 858 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 CCDC170Q8IYT3 715 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 EIF3CQ99613 913 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 ZNF287Q9HBT7 754 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 BARHL2Q9NY43 387 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 DMGDHQ9UI17 866 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 SAMM50Q9Y512 469 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 TPTE2Q6XPS3 522 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 MAATS1Q7Z4T9 603 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 BCAS4Q8TDM0 211 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 RAB34Q9BZG1 259 aa17.95■□□□□ 0.46
SNCAIP-202ENST00000261368 NKRFO15226 690 aaKnown RBP eCLIP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms