RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
MSH6-201ENST00000234420 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 KRIT1O00522 736 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 TADA3O75528 432 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 AK2P54819 239 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 RWDD2BP57060 319 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 LIN9Q5TKA1 542 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 DDX42Q86XP3 938 aaKnown RBP eCLIP12.08□□□□□ -0.48
MSH6-201ENST00000234420 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 HPS4Q9NQG7 708 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 PNMA2Q9UL42 364 aa12.08□□□□□ -0.48
MSH6-201ENST00000234420 CALUO43852 315 aaPredicted RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 SF3B3Q15393 1217 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 DDX53Q86TM3 631 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 CMTR1Q8N1G2 835 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 HIPK4Q8NE63 616 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 NFKBIL1Q9UBC1 381 aaPredicted RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 KCNK3O14649 394 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 TLR3O15455 904 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 IFNB1P01574 187 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 CAPRIN2Q6IMN6 1127 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 ADPGKQ9BRR6 497 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 P4HA1P13674 534 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 ECE1P42892 770 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 TRPC1P48995 793 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 CARSP49589 748 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 LIG4P49917 911 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 VCPP55072 806 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 IQUBQ8NA54 791 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 GRM8O00222 908 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 FGD4Q96M96 766 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 TAB2Q9NYJ8 693 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 SLC8A2Q9UPR5 921 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 DAB1O75553 588 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 HLA-DPA1P20036 260 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 POLA2Q14181 598 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 OTUD6AQ7L8S5 288 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 METTL23Q86XA0 190 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 C2orf69Q8N8R5 385 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 RETREG2Q8NC44 543 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 RSAD2Q8WXG1 361 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 IFIH1Q9BYX4 1025 aaKnown RBP12.07□□□□□ -0.48
MSH6-201ENST00000234420 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 DDHD2O94830 711 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 PHBP35232 272 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 PABPC4Q13310 644 aaKnown RBP eCLIP12.07□□□□□ -0.48
MSH6-201ENST00000234420 DACH2Q96NX9 599 aa12.07□□□□□ -0.48
MSH6-201ENST00000234420 ADCY8P40145 1251 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 RAPGEF5Q92565 580 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 ZMYND10O75800 440 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 PIK3CAP42336 1068 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 SNAP25P60880 206 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 ASPHQ12797 758 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 SYCE1Q8N0S2 351 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 CACTINQ8WUQ7 758 aaKnown RBP12.06□□□□□ -0.48
MSH6-201ENST00000234420 POC1B-GALNT4F8VUJ3 575 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 BCAMP50895 628 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 CALCRLQ16602 461 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 CALR3Q96L12 384 aaKnown RBP12.06□□□□□ -0.48
MSH6-201ENST00000234420 TXLNGQ9NUQ3 528 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 CHUKO15111 745 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 ZBTB22O15209 634 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 C8orf34Q49A92 452 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 CSGALNACT2Q8N6G5 542 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 RPL13P26373 211 aaKnown RBP12.06□□□□□ -0.48
MSH6-201ENST00000234420 IL9RQ01113 521 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 ATP6V1E2Q96A05 226 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 EFHD1Q9BUP0 239 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
MSH6-201ENST00000234420 TMOD1P28289 359 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 NFX1Q12986 1120 aaKnown RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 TADA2BQ86TJ2 420 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 PI4K2BQ8TCG2 481 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 ACTR5Q9H9F9 607 aaPredicted RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 TRPC7Q9HCX4 862 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 IPO11Q9UI26 975 aaKnown RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 STRIP2Q9ULQ0 834 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 PACSIN2Q9UNF0 486 aaPredicted RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 PRR23CQ6ZRP0 262 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 NUP58Q9BVL2 599 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 GPC4O75487 556 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 ALDH1L2Q3SY69 923 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 OTULINQ96BN8 352 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 MAGEB10Q96LZ2 347 aaPredicted RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 DENND2AQ9ULE3 1009 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 POLR2DO15514 142 aaKnown RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 CFLARO15519 480 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 BUB1O43683 1085 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 DEUP1Q05D60 604 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms