RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ZNF577Q9BSK1 485 aa25.42■■□□□ 1.66
TARBP1-201ENST00000040877 PUS7LQ9H0K6 701 aaKnown RBP25.42■■□□□ 1.66
TARBP1-201ENST00000040877 LRRIQ4A6NIV6 560 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 KIF11P52732 1056 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 LACTBP83111 547 aaPredicted RBP25.41■■□□□ 1.66
TARBP1-201ENST00000040877 KIF23Q02241 960 aaPredicted RBP25.41■■□□□ 1.66
TARBP1-201ENST00000040877 GEN1Q17RS7 908 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 PDZD4Q76G19 769 aaPredicted RBP25.41■■□□□ 1.66
TARBP1-201ENST00000040877 HAUS1Q96CS2 278 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 ZNF335Q9H4Z2 1342 aaPredicted RBP25.41■■□□□ 1.66
TARBP1-201ENST00000040877 BRIP1Q9BX63 1249 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 PCDHA5Q9Y5H7 936 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 SASH1O94885 1247 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 ZNF827Q17R98 1081 aa25.41■■□□□ 1.66
TARBP1-201ENST00000040877 USP17L3A6NCW0 530 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 USP17L4A6NCW7 530 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 USP17L1Q7RTZ2 530 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 SLC7A3Q8WY07 619 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 STAT2P52630 851 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 CYP4A11Q02928 519 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 GABPB1Q06547 395 aaPredicted RBP25.4■■□□□ 1.66
TARBP1-201ENST00000040877 RASGRF1Q13972 1273 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 SEPT2Q15019 361 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 MASTLQ96GX5 879 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 NACC1Q96RE7 527 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 ADRA2BP18089 450 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 EXOC3L4Q17RC7 722 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 IKBKBO14920 756 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 CYP27B1O15528 508 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 COPB1P53618 953 aaKnown RBP25.4■■□□□ 1.66
TARBP1-201ENST00000040877 ELF2Q15723 593 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 DGKHQ86XP1 1220 aa25.4■■□□□ 1.66
TARBP1-201ENST00000040877 STAM2O75886 525 aa25.39■■□□□ 1.66
TARBP1-201ENST00000040877 POLR2FP61218 127 aaKnown RBP25.39■■□□□ 1.66
TARBP1-201ENST00000040877 RETREG2Q8NC44 543 aa25.39■■□□□ 1.66
TARBP1-201ENST00000040877 HHATQ5VTY9 493 aa25.39■■□□□ 1.66
TARBP1-201ENST00000040877 PSMB7Q99436 277 aa25.39■■□□□ 1.66
TARBP1-201ENST00000040877 BRD3Q15059 726 aa25.39■■□□□ 1.65
TARBP1-201ENST00000040877 VPS52Q8N1B4 723 aa25.39■■□□□ 1.65
TARBP1-201ENST00000040877 RCOR1Q9UKL0 485 aa25.39■■□□□ 1.65
TARBP1-201ENST00000040877 NDUFAB1O14561 156 aa25.39■■□□□ 1.65
TARBP1-201ENST00000040877 PPP1R2P3Q6NXS1 205 aa25.39■■□□□ 1.65
TARBP1-201ENST00000040877 PPM1KQ8N3J5 372 aa25.39■■□□□ 1.65
TARBP1-201ENST00000040877 POMGNT1Q8WZA1 660 aa25.39■■□□□ 1.65
TARBP1-201ENST00000040877 CIB2O75838 187 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 SLFN14P0C7P3 912 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 ABCB4P21439 1286 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 SYDE2Q5VT97 1194 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 PPP2R2CQ9Y2T4 447 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 PRKAB2O43741 272 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 MECOMQ03112 1051 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 SPOUT1Q5T280 376 aaKnown RBP25.38■■□□□ 1.65
TARBP1-201ENST00000040877 SPICE1Q8N0Z3 855 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 TBCKQ8TEA7 893 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 RSAD2Q8WXG1 361 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 CDHR2Q9BYE9 1310 aa25.38■■□□□ 1.65
TARBP1-201ENST00000040877 PLEKHG2Q9H7P9 1386 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 DENND2CQ68D51 928 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 SND1Q7KZF4 910 aaKnown RBP eCLIP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 DPP9Q86TI2 863 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 PPFIBP2Q8ND30 876 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 CNOT6LQ96LI5 555 aaKnown RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 NARFQ9UHQ1 456 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 DLATP10515 647 aaKnown RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 MFAP3P55082 362 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 MIS18BP1Q6P0N0 1132 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 KCTD1Q719H9 257 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 ARMC9Q7Z3E5 817 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 TDRD7Q8NHU6 1098 aaKnown RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 PIGSQ96S52 555 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 ZSWIM5Q9P217 1185 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 CEP57Q86XR8 500 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 ATP2A3Q93084 1043 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 GJA10Q969M2 543 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 TUBGCP2Q9BSJ2 902 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 DDX23Q9BUQ8 820 aaKnown RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 ZNF277Q9NRM2 450 aaPredicted RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 HNRNPDLO14979 420 aaKnown RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 PTK2Q05397 1052 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 NT5C1BQ96P26 610 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 MMS19Q96T76 1030 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 MED10Q9BTT4 135 aa25.37■■□□□ 1.65
TARBP1-201ENST00000040877 PPANQ9NQ55 473 aaKnown RBP25.37■■□□□ 1.65
TARBP1-201ENST00000040877 KRT81Q14533 505 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 CCDC127Q96BQ5 260 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 TMEM206Q9H813 350 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 HSPA1LP34931 641 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 PSMC2P35998 433 aaKnown RBP25.36■■□□□ 1.65
TARBP1-201ENST00000040877 CASC4Q6P4E1 433 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 RSPH3Q86UC2 560 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 LINC00301Q8NCQ3 95 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 PI4K2BQ8TCG2 481 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 CAPN9O14815 690 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 KRT15P19012 456 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 CDC25BP30305 580 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 ETF1P62495 437 aaKnown RBP25.36■■□□□ 1.65
TARBP1-201ENST00000040877 PKP1Q13835 747 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 CIAPIN1Q6FI81 312 aa25.36■■□□□ 1.65
TARBP1-201ENST00000040877 PI16Q6UXB8 463 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms