RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 NONOQ15233 471 aaKnown RBP eCLIP25.05■■□□□ 1.6
HOXC8-201ENST00000040584 MRPL11Q9Y3B7 192 aaKnown RBP25.05■■□□□ 1.6
HOXC8-201ENST00000040584 SPDYE16A6NNV3 312 aaPredicted RBP25.04■■□□□ 1.6
HOXC8-201ENST00000040584 HOXA7P31268 230 aaPredicted RBP25.04■■□□□ 1.6
HOXC8-201ENST00000040584 HUNKP57058 714 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 ZNF174Q15697 407 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 TTC38Q5R3I4 469 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 FASTKD5Q7L8L6 764 aaKnown RBP25.04■■□□□ 1.6
HOXC8-201ENST00000040584 AGTPBP1Q9UPW5 1226 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 ABCB11O95342 1321 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 ME1P48163 572 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 RBM43Q6ZSC3 357 aaKnown RBP25.04■■□□□ 1.6
HOXC8-201ENST00000040584 REPS2Q8NFH8 660 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 FAM200AQ8TCP9 573 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 TBC1D5Q92609 795 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 TNMDQ9H2S6 317 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.04■■□□□ 1.6
HOXC8-201ENST00000040584 PASKQ96RG2 1323 aa25.04■■□□□ 1.6
HOXC8-201ENST00000040584 MARCKSP29966 332 aaPredicted RBP25.03■■□□□ 1.6
HOXC8-201ENST00000040584 TBCKQ8TEA7 893 aa25.03■■□□□ 1.6
HOXC8-201ENST00000040584 PCDHA7Q9UN72 937 aa25.03■■□□□ 1.6
HOXC8-201ENST00000040584 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.03■■□□□ 1.6
HOXC8-201ENST00000040584 MYPNQ86TC9 1320 aa25.03■■□□□ 1.6
HOXC8-201ENST00000040584 GOLGA6L6A8MZA4 724 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 PPP6R2O75170 966 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 ALAS1P13196 640 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 HOXA13P31271 388 aaPredicted RBP25.02■■□□□ 1.6
HOXC8-201ENST00000040584 TMEM132BQ14DG7 1078 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 GPAT2Q6NUI2 795 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 P2RX7Q99572 595 aaKnown RBP25.02■■□□□ 1.6
HOXC8-201ENST00000040584 CFBP00751 764 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 SPRYD7Q5W111 196 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 CLSTN2Q9H4D0 955 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 HOMER2Q9NSB8 354 aa25.02■■□□□ 1.6
HOXC8-201ENST00000040584 RRP9O43818 475 aaKnown RBP25.01■■□□□ 1.59
HOXC8-201ENST00000040584 MCM7P33993 719 aa25.01■■□□□ 1.59
HOXC8-201ENST00000040584 IRX3P78415 501 aaPredicted RBP25.01■■□□□ 1.59
HOXC8-201ENST00000040584 SMC1BQ8NDV3 1235 aa25.01■■□□□ 1.59
HOXC8-201ENST00000040584 MS4A4AQ96JQ5 239 aa25.01■■□□□ 1.59
HOXC8-201ENST00000040584 ASCC2Q9H1I8 757 aaPredicted RBP25.01■■□□□ 1.59
HOXC8-201ENST00000040584 ZNF214Q9UL59 606 aaPredicted RBP25.01■■□□□ 1.59
HOXC8-201ENST00000040584 CEP131Q9UPN4 1083 aa25.01■■□□□ 1.59
HOXC8-201ENST00000040584 MRVI1Q9Y6F6 885 aa25.01■■□□□ 1.59
HOXC8-201ENST00000040584 MORC2Q9Y6X9 1032 aaPredicted RBP25.01■■□□□ 1.59
HOXC8-201ENST00000040584 COL11A1P12107 1806 aaPredicted RBP25.01■■□□□ 1.59
HOXC8-201ENST00000040584 LIG1P18858 919 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 ADALQ6DHV7 355 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 POTEEQ6S8J3 1075 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 JMYQ8N9B5 988 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 CLEC4DQ8WXI8 215 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 RIPK3Q9Y572 518 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 PIK3CDO00329 1044 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 GTF2A2P52657 109 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 LETM2Q2VYF4 491 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 AXDND1Q5T1B0 1012 aaPredicted RBP25■■□□□ 1.59
HOXC8-201ENST00000040584 NEK8Q86SG6 692 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 DACT1Q9NYF0 836 aa25■■□□□ 1.59
HOXC8-201ENST00000040584 GCOM1H8Y6P7 765 aaPredicted RBP24.99■■□□□ 1.59
HOXC8-201ENST00000040584 NFIBO00712 420 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 CTAGE5O15320 804 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 POLR2MP0CAP2 368 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 CETPP11597 493 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 OAZ1P54368 228 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 TYRO3Q06418 890 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 MUM1L1Q5H9M0 696 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 SNRNP48Q6IEG0 339 aaKnown RBP24.99■■□□□ 1.59
HOXC8-201ENST00000040584 SAPCD2Q86UD0 394 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 ANO3Q9BYT9 981 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 PNMA2Q9UL42 364 aa24.99■■□□□ 1.59
HOXC8-201ENST00000040584 EDIL3O43854 480 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 PEX10O60683 326 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 BMP15O95972 392 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 ZBTB48P10074 688 aaPredicted RBP24.98■■□□□ 1.59
HOXC8-201ENST00000040584 AP3B2Q13367 1082 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 PLS1Q14651 629 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 TRERF1Q96PN7 1200 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 CCL15-CCL14A0A0B4J2E2 113 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 A0A1W2PQ27 194 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 A0A1W2PQ64 194 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 A0A1W2PQD8 194 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 SPDYE3A6NKU9 549 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 PTGDRQ13258 359 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 PABPC4Q13310 644 aaKnown RBP eCLIP24.98■■□□□ 1.59
HOXC8-201ENST00000040584 CCL15Q16663 113 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 LBX2Q6XYB7 198 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 FCHSD1Q86WN1 690 aa24.98■■□□□ 1.59
HOXC8-201ENST00000040584 ATP2A1O14983 1001 aa24.97■■□□□ 1.59
HOXC8-201ENST00000040584 CCNT1O60563 726 aaKnown RBP24.97■■□□□ 1.59
HOXC8-201ENST00000040584 OSBPP22059 807 aa24.97■■□□□ 1.59
HOXC8-201ENST00000040584 ZNF157P51786 506 aaPredicted RBP24.97■■□□□ 1.59
HOXC8-201ENST00000040584 HERVK_113P62684 666 aa24.97■■□□□ 1.59
HOXC8-201ENST00000040584 SASS6Q6UVJ0 657 aa24.97■■□□□ 1.59
HOXC8-201ENST00000040584 TEX2Q8IWB9 1127 aa24.97■■□□□ 1.59
HOXC8-201ENST00000040584 BRI3BPQ8WY22 251 aa24.97■■□□□ 1.59
HOXC8-201ENST00000040584 TEX13BQ9BXU2 312 aa24.97■■□□□ 1.59
HOXC8-201ENST00000040584 R3HCC1Q9Y3T6 440 aaKnown RBP24.97■■□□□ 1.59
HOXC8-201ENST00000040584 STAT3P40763 770 aa24.96■■□□□ 1.59
HOXC8-201ENST00000040584 MCTP2Q6DN12 878 aa24.96■■□□□ 1.59
HOXC8-201ENST00000040584 RNF146Q9NTX7 359 aa24.96■■□□□ 1.59
HOXC8-201ENST00000040584 BTBD7Q9P203 1132 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms