RNA–Protein interactions for RNA: ENSMUST00000112456.8

Sh3kbp1-206, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3kbp1, Length 7,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-206ENSMUST00000112456 Spire2Q8K1S6 718 aa13.53□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Slc12a6Q924N4 1150 aa13.53□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Atp1b3P97370 278 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 EnahQ03173 802 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Gm14685Q52KH6 695 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 UrgcpQ5NCI0 926 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Sgsm1Q8BPQ7 1093 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Polr2bQ8CFI7 1174 aaKnown RBP13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Vmn1r191Q8K4D0 298 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Thoc1Q8R3N6 657 aaKnown RBP13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Mmp8O70138 465 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Sash1P59808 1230 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Srrm1Q52KI8 946 aaKnown RBP13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Trim38Q5SZ99 471 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Rhpn1Q61085 643 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 NostrinQ6WKZ7 506 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 RabggtaQ9JHK4 567 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Gm6657A0A1B0GRJ3 277 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Sfi1Q3UZY0 1216 aaKnown RBP13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Utp18Q5SSI6 552 aaKnown RBP13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 PapolaQ61183 739 aa13.52□□□□□ -0.24
Sh3kbp1-206ENSMUST00000112456 Col20a1Q923P0 1320 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Mroh2bQ7M6Y6 1581 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Lrrc23O35125 340 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Kifc3O35231 824 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ankrd13aQ80UP5 588 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Setd3Q91WC0 594 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Rbm43Q99J64 343 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Gm10093D3YYI8 482 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Gm3248K7N721 186 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Hdac1O09106 482 aaKnown RBP13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Stx1bP61264 288 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Pfkfb1P70266 471 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Nr1h4Q60641 488 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Svs3bQ8BZH8 265 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Pm20d1Q8C165 503 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ppp6r3Q922D4 844 aa13.52□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Polr3aB2RXC6 1390 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Foxred2Q3USW5 665 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Trim60Q8VI40 466 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Adarb2Q9JI20 745 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Il4rP16382 810 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Micall2Q3TN34 1009 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Olfr1415Q7TQS4 311 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Smim5Q8BT42 78 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Olfr1416Q8VGU4 312 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 SyncQ9EPM5 470 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ubn2Q80WC1 1314 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Fam207aP58468 219 aaKnown RBP13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Slc8a1P70414 970 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Q8BZJ8 459 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Rnf112Q96DY5 654 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Clic4Q9QYB1 253 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Atf7ipQ7TT18 1306 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ttc30a2A2AKQ8 664 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Cyth3O08967 399 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Tfdp1Q08639 410 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Edem3Q2HXL6 931 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ckap2Q3V1H1 664 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 TxlngQ8BHN1 524 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Atg16l1Q8C0J2 607 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Rbm41Q8JZV4 413 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ces1dQ8VCT4 565 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ttc30a1Q99J38 664 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ttc30bQ9CY00 664 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 GdaQ9R111 454 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ccdc194A0A140LIT1 234 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Tnip3A0A1D5RMN0 279 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Vmn2r68L7N2B3 851 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 GfapP03995 430 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Slc3a2P10852 526 aaKnown RBP13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Myo1fP70248 1099 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Thrap3Q569Z6 951 aaKnown RBP13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ttc8Q8VD72 515 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 ArhgdiaQ99PT1 204 aaKnown RBP13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Tubb4aQ9D6F9 444 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Tpcn1Q9EQJ0 817 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Hdac6Q9Z2V5 1149 aa13.51□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Gm6588E9Q3K0 461 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 RimklbQ80WS1 387 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 HdlbpQ8VDJ3 1268 aaKnown RBP13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ccdc24E9PUW8 296 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Lig1P37913 916 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Dynll1P63168 89 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 FcgrtQ61559 365 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Ctdspl2Q8BG15 465 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Snx2Q9CWK8 519 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Twf2Q9Z0P5 349 aaKnown RBP13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 S100a5P63084 93 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 YwhahP68510 246 aaKnown RBP13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Kdm5bQ80Y84 1544 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Calb1P12658 261 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Il15P48346 162 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Sh3bp1P55194 680 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Krt80Q0VBK2 452 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Fam83bQ0VBM2 1012 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Rasgrp4Q8BTM9 673 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Trim16Q99PP9 556 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 Mis12Q9CY25 206 aa13.5□□□□□ -0.25
Sh3kbp1-206ENSMUST00000112456 DexiQ9WUQ7 95 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 124 ms