RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Emilin2Q8K482 1074 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Mtmr4Q91XS1 1190 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 AacsQ9D2R0 672 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 PfasQ5SUR0 1337 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gm45208A0A140LJ36 292 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Bpifb4A2BGH0 617 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 1810065E05RikQ5NC41 235 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Rbbp6P97868 1790 aaKnown RBP17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ltn1Q6A009 1767 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gm1993A6X8I0 212 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 SlxD3Z347 212 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Mx1P09922 631 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Tut1Q8R3F9 869 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Dnajc17Q91WT4 303 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Kremen1Q99N43 473 aa17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Knop1Q9Z2Q2 478 aaKnown RBP17.85■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Kif13bA0A286YCV9 1847 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 MybP06876 636 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Lrrc4bP0C192 709 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Atp6v1aP50516 617 aaKnown RBP17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Top1Q04750 767 aaKnown RBP17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Pip5kl1Q6U7H8 395 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Slc9b1Q8C0X2 565 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ptf1aQ9QX98 324 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Rsbn1lD3Z0K6 821 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Atp6v0a2P15920 856 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ccdc73Q8CDM4 1066 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Kiaa1024Q8K3V7 917 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Alpk1Q9CXB8 1231 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 March8Q9DBD2 286 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Tacc2Q9JJG0 1149 aa17.84■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Pdrg1P59048 133 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Pafah1b1P63005 410 aaKnown RBP17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Kcnj11Q61743 390 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Irak1Q62406 710 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 March6Q6ZQ89 909 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Ercc6lQ8BHK9 1240 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Fam193aQ8CGI1 1231 aaKnown RBP17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 SltmQ8CH25 1031 aaKnown RBP17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Gdap1l1Q8VE33 370 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Tor1aip1Q921T2 595 aaKnown RBP17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Efhd1Q9D4J1 240 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Sept14Q9DA97 430 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Tmem191cQ9JJB1 302 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Dnajc7Q9QYI3 494 aa17.83■□□□□ 0.45
Ckap4-201ENSMUST00000053871 Lrrc55Q3UY51 311 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Lrrfip1Q3UZ39 729 aaKnown RBP17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Znf827Q505G8 1078 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 MmeQ61391 750 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Krt87Q6IMF0 495 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 RragaQ80X95 313 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Igdcc3Q8BQC3 813 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Xrcc4Q924T3 326 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Glrx3Q9CQM9 337 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Krt34Q9D646 392 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Cbx8Q9QXV1 362 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Apol6B7ZC55 329 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Hps5P59438 1126 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Eif3j1Q3UGC7 261 aaKnown RBP17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Eif3j2Q66JS6 263 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Lrrc1Q80VQ1 524 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Kif2bQ8C0N1 668 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Phf20l1Q8CCJ9 1013 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Klf15Q9EPW2 415 aa17.83■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Ube3aO08759 870 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Akr1b1P45376 316 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Ctnna3Q65CL1 895 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Ppp1r11Q8K1L5 131 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Krt79Q8VED5 531 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Sar1bQ9CQC9 198 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 DonsonQ9QXP4 560 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Nlrp5Q9R1M5 1163 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Scgb2b11A0A087WR49 112 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 EgfrQ01279 1210 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Pls1Q3V0K9 630 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Large2Q5XPT3 690 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Cct6bQ61390 531 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Antxr2Q6DFX2 487 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 GsdmeQ9Z2D3 512 aa17.82■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Pip4k2aO70172 405 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 GalcP54818 684 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Tmem35bQ3U0Y2 150 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 EregQ61521 162 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Efcab8Q8C9R9 203 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Card14Q99KF0 999 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Syce1Q9D495 329 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 AatfQ9JKX4 526 aaKnown RBP17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 AdnpQ9Z103 1108 aaKnown RBP17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Lbhd1A0A087WPA0 259 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Gja3Q64448 417 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Trmt2aQ8BNV1 574 aaKnown RBP17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Arhgef6Q8K4I3 771 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Ndst4Q9EQW8 872 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Zcchc17Q9ESX4 241 aaKnown RBP17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Lztfl1Q9JHQ5 299 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Dock5B2RY04 1868 aa17.81■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Ifnar1P33896 590 aa17.8■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Stat3P42227 770 aaKnown RBP17.8■□□□□ 0.44
Ckap4-201ENSMUST00000053871 Fbln1Q08879 705 aa17.8■□□□□ 0.44
Ckap4-201ENSMUST00000053871 KhsrpQ3U0V1 748 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 144 ms