RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Cdan1Q8CC12 1239 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Slc14a2Q8R4T9 930 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ddah1Q9CWS0 285 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Rbm33Q9CXK9 1231 aaKnown RBP14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Casp1P29452 402 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Rpusd2Q149F1 553 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Slc9a1Q61165 820 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ildr1Q8CBR1 537 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Nek9Q8K1R7 984 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Arl10Q9QXJ4 243 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Cyp2ab1S4R196 498 aa14.81□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 TbcaP48428 108 aaKnown RBP14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Uri1Q3TLD5 531 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 PrimpolQ6P1E7 537 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Trim37Q6PCX9 961 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Efcab8Q8C9R9 203 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Spats2Q8K1N4 545 aaKnown RBP14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Pkd2l2Q9JLG4 621 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 NeblQ0II04 452 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Tbc1d2bQ3U0J8 965 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ccdc114Q3UX62 658 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Pex1Q5BL07 1284 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Hgh1Q8C3I8 393 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Glrx3Q9CQM9 337 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 PatjQ63ZW7 1834 aa14.8□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Gm10378F6XQQ1 160 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ccdc42Q5SV66 316 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ccdc172Q810N9 267 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 IarsQ8BU30 1262 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Q8C6G1 249 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Rbm28Q8CGC6 750 aaKnown RBP14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Bicdl2Q8CHW5 507 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Sgpp1Q9JI99 430 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Egfl6Q9JJZ5 550 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 GdaQ9R111 454 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Nsrp1Q5NCR9 542 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Insm1Q63ZV0 521 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Slc17a8Q8BFU8 601 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Rps6kc1Q8BLK9 1056 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ubac1Q8VDI7 409 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Cd2apQ9JLQ0 637 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Mdh1P14152 334 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Glg1Q61543 1175 aaKnown RBP14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Papd7Q6PB75 542 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Fmnl3Q6ZPF4 1028 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Wdr3Q8BHB4 942 aaKnown RBP14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Sfr1Q8BP27 319 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Caps2Q8BUG5 550 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Eif3cQ8R1B4 911 aaKnown RBP14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Pcdha12Q91Y18 950 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Apopt1Q9CQW7 192 aa14.79□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 ByslO54825 436 aaKnown RBP14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Arhgap6O54834 987 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Tax1bp1Q3UKC1 814 aaKnown RBP14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Pacs2Q3V3Q7 862 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 GnptabQ69ZN6 1235 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Apol10aQ8CCA5 318 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Znrd1-asQ8R0E5 213 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Tmem134Q8R0J4 195 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 RarsQ9D0I9 660 aaKnown RBP14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Inpp4aQ9EPW0 939 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Snx1Q9WV80 522 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Scgb2b11A0A087WR49 112 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Dynll1P63168 89 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Usp49Q6P9L4 685 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Desi2Q9D291 194 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Trim42Q9D2H5 723 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 ArcQ9WV31 396 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Slfn14V9GXG1 899 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Btaf1E9QAE3 1848 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 SynrgQ5SV85 1306 aa14.78□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 AW822073A0A0N4SUK1 652 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Gm5737A0A140LI11 423 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Gm3893E9Q1I1 302 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Vmn2r68L7N2B3 851 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ccdc51Q3URS9 406 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Ankrd40Q5SUE8 363 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Sema4bQ62179 823 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Fkbp3Q62446 224 aaKnown RBP14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Srrm3Q80WV7 648 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Clic6Q8BHB9 596 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 HibadhQ99L13 335 aaKnown RBP14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Tfcp2Q9ERA0 502 aa14.77□□□□□ -0.04
Prpf38b-201ENSMUST00000029480 Cd151O35566 253 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Myo19Q5SV80 963 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Nell2Q61220 819 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Q66JV7 365 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Ncoa7Q6DFV7 943 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 NelfbQ8C4Y3 580 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Tmem63cQ8CBX0 802 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Tmem60Q8K174 133 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Spata4Q8K3V1 295 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Vmn1r218Q8R261 298 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Sgsm3Q8VCZ6 750 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Vps16Q920Q4 839 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Col5a2Q3U962 1497 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Ccdc88aQ5SNZ0 1873 aa14.77□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Tnni2P13412 182 aa14.76□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Pabpc4Q6PHQ9 660 aaKnown RBP14.76□□□□□ -0.05
Prpf38b-201ENSMUST00000029480 Znf24Q91VN1 368 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms