RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Prpf40bQ80W14 870 aa12.26□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Dpp8Q80YA7 892 aa12.26□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Trim9Q8C7M3 817 aa12.26□□□□□ -0.45
Ldb3-202ENSMUST00000022328 WaslQ91YD9 501 aa12.26□□□□□ -0.45
Ldb3-202ENSMUST00000022328 MymkQ9D1N4 221 aa12.26□□□□□ -0.45
Ldb3-202ENSMUST00000022328 RabggtaQ9JHK4 567 aa12.26□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Pkd2l2Q9JLG4 621 aa12.26□□□□□ -0.45
Ldb3-202ENSMUST00000022328 TicrrQ8BQ33 1889 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Bpifb4A2BGH0 617 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Exoc3l2D3YUP5 789 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Gm5934D3Z4U6 212 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Kifc2O08672 792 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Mrps31Q61733 384 aaKnown RBP12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ccdc57Q6PHN1 1016 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Phldb2Q8K1N2 1249 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 AdpgkQ8VDL4 496 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Zkscan3Q91VW9 553 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Kctd10Q922M3 315 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Efhd1Q9D4J1 240 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ccdc83Q9D4V3 305 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Egfl6Q9JJZ5 550 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Nlrp5Q9R1M5 1163 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Pitpnm2Q6ZPQ6 1335 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ddx23D3Z0M9 819 aaKnown RBP12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Vcam1P29533 739 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 PpardP35396 440 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Rad23aP54726 363 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Nol4P60954 483 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Igbp1Q61249 340 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Kdm1aQ6ZQ88 853 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Nek5Q7TSC3 627 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Cgref1Q8R1U2 281 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ttll1Q91V51 423 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Prl2c5Q9JLV9 222 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 GsdmeQ9Z2D3 512 aa12.25□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ugt1a8D3Z748 530 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ugt1a10E9PXN7 530 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Scgb2b19J3QM75 112 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Zbtb39Q6PDK0 712 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Znf18Q810A1 556 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Dnajc19Q9CQV7 116 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Mis18aQ9CZJ6 204 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Syce1Q9D495 329 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Cd274Q9EP73 290 aa12.24□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Akr1c19G3X9Y6 323 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Eif6O55135 245 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Tpp1O89023 562 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Dnm2P39054 870 aaKnown RBP12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Acbd5Q5XG73 508 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Fkbp3Q62446 224 aaKnown RBP12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Atp2b4Q6Q477 1205 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Onecut3Q8K557 490 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Tesk2Q8VCT9 570 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Git2Q9JLQ2 708 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Fxr2Q9WVR4 673 aaKnown RBP12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ppp2r3dQ9Z176 491 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Cyp2ab1S4R196 498 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Foxn3Q499D0 457 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 CtcfQ61164 736 aaKnown RBP12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Q66JV7 365 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Krt87Q6IMF0 495 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Asic1Q6NXK8 526 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Arhgef6Q8K4I3 771 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ccdc12Q8R344 166 aaKnown RBP12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Exoc1Q8R3S6 894 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Smc1bQ920F6 1248 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Galntl5Q9D4M9 431 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Cbx8Q9QXV1 362 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Col4a5Q63ZW6 1691 aa12.23□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Cnbd1B1AWM0 430 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Camsap3Q80VC9 1252 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 HyiQ8R1F5 277 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Rab3il1Q8VDV3 383 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Tor1aip1Q921T2 595 aaKnown RBP12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Apopt1Q9CQW7 192 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Krt34Q9D646 392 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Map7d1A2AJI0 846 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Rsbn1lD3Z0K6 821 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Gm10378F6XQQ1 160 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Atp6v1aP50516 617 aaKnown RBP12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Gja5Q01231 358 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ssrp1Q08943 708 aaKnown RBP12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Emc10Q3TAS6 258 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Fam198bQ3UPI1 517 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Rasa3Q60790 834 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Haus6Q6NV99 933 aaKnown RBP12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Q8C1R3 189 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Rhobtb3Q9CTN4 611 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 EhhadhQ9DBM2 718 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Slc26a4Q9R155 780 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 PfasQ5SUR0 1337 aa12.22□□□□□ -0.45
Ldb3-202ENSMUST00000022328 1700003F12RikA2AKE5 210 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Pip4k2aO70172 405 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Atp8b1Q148W0 1251 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Chrna5Q2MKA5 467 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Pnma5Q5DTT8 618 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Cracr2bQ80ZJ8 394 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Ccdc14Q8K2J4 934 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 CutaQ9CQ89 177 aa12.21□□□□□ -0.45
Ldb3-202ENSMUST00000022328 Klhl10Q9D5V2 608 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms