RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 GWT1P47026 490 aa-1.03□□□□□ -2.57
snR53snR53 YIP5P53108 310 aa-1.03□□□□□ -2.57
snR53snR53 RHO4Q00246 291 aa-1.03□□□□□ -2.57
snR53snR53 PNG1Q02890 363 aa-1.03□□□□□ -2.57
snR53snR53 NUP145P49687 1317 aa-1.04□□□□□ -2.58
snR53snR53 NFT1P0CE68 1218 aa-1.04□□□□□ -2.58
snR53snR53 ARP2P32381 391 aaKnown RBP-1.04□□□□□ -2.58
snR53snR53 STB6P36085 766 aa-1.04□□□□□ -2.58
snR53snR53 YNL208WP40159 199 aaKnown RBP-1.04□□□□□ -2.58
snR53snR53 CWC25P53854 179 aaKnown RBP-1.04□□□□□ -2.58
snR53snR53 IBD2P53892 351 aa-1.04□□□□□ -2.58
snR53snR53 YPL108WQ02872 168 aaPredicted RBP-1.04□□□□□ -2.58
snR53snR53 NTG2Q08214 380 aa-1.04□□□□□ -2.58
snR53snR53 YML003WP0CF16 290 aa-1.05□□□□□ -2.58
snR53snR53 STI1P15705 589 aaKnown RBP RIP-Chip data-1.05□□□□□ -2.58not detected
snR53snR53 PGS1P25578 521 aa-1.05□□□□□ -2.58
snR53snR53 THI4P32318 326 aa-1.05□□□□□ -2.58
snR53snR53 CBF5P33322 483 aaKnown RBP RIP-Chip data-1.05□□□□□ -2.58not detected
snR53snR53 YKL091CP33324 310 aaKnown RBP-1.05□□□□□ -2.58
snR53snR53 YBL081WP38180 368 aaKnown RBP-1.05□□□□□ -2.58
snR53snR53 ANS1P38832 159 aa-1.05□□□□□ -2.58
snR53snR53 SSP120P39931 234 aaKnown RBP-1.05□□□□□ -2.58
snR53snR53 ELP2P42935 788 aa-1.05□□□□□ -2.58
snR53snR53 CTF18P49956 741 aa-1.05□□□□□ -2.58
snR53snR53 MDG1P53885 366 aa-1.05□□□□□ -2.58
snR53snR53 TFB2Q02939 513 aa-1.05□□□□□ -2.58
snR53snR53 MTG1Q03151 367 aaPredicted RBP-1.05□□□□□ -2.58
snR53snR53 YMR102CQ03177 834 aa-1.05□□□□□ -2.58
snR53snR53 RSM28Q03430 361 aa-1.05□□□□□ -2.58
snR53snR53 TRI1Q05024 226 aa-1.05□□□□□ -2.58
snR53snR53 ATG23Q06671 453 aa-1.05□□□□□ -2.58
snR53snR53 YLR125WQ12138 136 aa-1.05□□□□□ -2.58
snR53snR53 TY2A-LR1P0C2J4 438 aa-1.06□□□□□ -2.58
snR53snR53 TY2A-FP0CX61 438 aa-1.06□□□□□ -2.58
snR53snR53 TY2A-GR2P0CX62 438 aa-1.06□□□□□ -2.58
snR53snR53 LCB1P25045 558 aaKnown RBP-1.06□□□□□ -2.58
snR53snR53 TY2A-CP25383 438 aa-1.06□□□□□ -2.58
snR53snR53 AAP1P37898 856 aaKnown RBP-1.06□□□□□ -2.58
snR53snR53 PFF1P38244 976 aa-1.06□□□□□ -2.58
snR53snR53 WSS1P38838 269 aa-1.06□□□□□ -2.58
snR53snR53 SSU1P41930 458 aa-1.06□□□□□ -2.58
snR53snR53 PCP1P53259 346 aa-1.06□□□□□ -2.58
snR53snR53 SMM1P53720 384 aaKnown RBP-1.06□□□□□ -2.58
snR53snR53 TY2A-DR2Q03483 438 aa-1.06□□□□□ -2.58
snR53snR53 NSE3Q05541 303 aa-1.06□□□□□ -2.58
snR53snR53 LIP2Q06005 328 aa-1.06□□□□□ -2.58
snR53snR53 MCH1Q07376 486 aa-1.06□□□□□ -2.58
snR53snR53 YTM1Q12024 460 aaPredicted RBP-1.06□□□□□ -2.58
snR53snR53 YPR027CQ12079 277 aa-1.06□□□□□ -2.58
snR53snR53 TY2A-BQ12260 438 aa-1.06□□□□□ -2.58
snR53snR53 TY2A-OR2Q12293 438 aa-1.06□□□□□ -2.58
snR53snR53 TY2A-DR1Q12392 438 aa-1.06□□□□□ -2.58
snR53snR53 TY2A-OR1Q12439 438 aa-1.06□□□□□ -2.58
snR53snR53 RRD2Q12461 358 aa-1.06□□□□□ -2.58
snR53snR53 TY2A-DR3Q99303 438 aa-1.06□□□□□ -2.58
snR53snR53 LEU4P06208 619 aaKnown RBP-1.07□□□□□ -2.58
snR53snR53 PUT4P15380 627 aa-1.07□□□□□ -2.58
snR53snR53 NTR2P36118 322 aaPredicted RBP-1.07□□□□□ -2.58
snR53snR53 PGU1P47180 361 aa-1.07□□□□□ -2.58
snR53snR53 YPS5P53057 165 aa-1.07□□□□□ -2.58
snR53snR53 CRN1Q06440 651 aa-1.07□□□□□ -2.58
snR53snR53 CRD1Q07560 283 aa-1.07□□□□□ -2.58
snR53snR53 ZUO1P32527 433 aaKnown RBP-1.08□□□□□ -2.58
snR53snR53 ESL2P36168 1195 aa-1.08□□□□□ -2.58
snR53snR53 IFA38P38286 347 aa-1.08□□□□□ -2.58
snR53snR53 FAU1P40099 211 aa-1.08□□□□□ -2.58
snR53snR53 NUP82P40368 713 aa-1.08□□□□□ -2.58
snR53snR53 YIR035CP40579 254 aa-1.08□□□□□ -2.58
snR53snR53 AVT4P50944 713 aa-1.08□□□□□ -2.58
snR53snR53 YGL262WP53054 175 aa-1.08□□□□□ -2.58
snR53snR53 ORC1P54784 914 aaPredicted RBP-1.08□□□□□ -2.58
snR53snR53 TPS1Q00764 495 aaKnown RBP-1.08□□□□□ -2.58
snR53snR53 SLD5Q03406 294 aa-1.08□□□□□ -2.58
snR53snR53 YOL057WQ08225 711 aa-1.08□□□□□ -2.58
snR53snR53 STP2P38704 541 aa-1.09□□□□□ -2.58
snR53snR53 YHR210CP38893 341 aa-1.09□□□□□ -2.58
snR53snR53 OST1P41543 476 aaKnown RBP-1.09□□□□□ -2.58
snR53snR53 PYK2P52489 506 aaKnown RBP-1.09□□□□□ -2.58
snR53snR53 STR3P53101 465 aaKnown RBP-1.09□□□□□ -2.58
snR53snR53 MTM1P53320 366 aa-1.09□□□□□ -2.58
snR53snR53 MIX17Q03667 156 aa-1.09□□□□□ -2.58
snR53snR53 MTQ2Q03920 221 aaPredicted RBP-1.09□□□□□ -2.58
snR53snR53 APL4Q12028 832 aa-1.09□□□□□ -2.58
snR53snR53 DAL3P32459 195 aa-1.1□□□□□ -2.59
snR53snR53 AST1P35183 429 aa-1.1□□□□□ -2.59
snR53snR53 MIX23P38162 196 aa-1.1□□□□□ -2.59
snR53snR53 SWP82P43554 623 aa-1.1□□□□□ -2.59
snR53snR53 RRT5P43607 289 aa-1.1□□□□□ -2.59
snR53snR53 YGR237CP50089 785 aa-1.1□□□□□ -2.59
snR53snR53 ART5P53244 586 aaKnown RBP-1.1□□□□□ -2.59
snR53snR53 PLP2Q12017 286 aa-1.1□□□□□ -2.59
snR53snR53 LSP1Q12230 341 aaKnown RBP-1.1□□□□□ -2.59
snR53snR53 EXO70P19658 623 aa-1.11□□□□□ -2.59
snR53snR53 RML2P32611 393 aa-1.11□□□□□ -2.59
snR53snR53 CSE2P33308 149 aa-1.11□□□□□ -2.59
snR53snR53 GCD10P41814 478 aa-1.11□□□□□ -2.59
snR53snR53 RPN11P43588 306 aaKnown RBP-1.11□□□□□ -2.59
snR53snR53 RPS10BP46784 105 aaKnown RBP-1.11□□□□□ -2.59
snR53snR53 SMC3P47037 1230 aa-1.11□□□□□ -2.59
snR53snR53 PMT3P47190 753 aa-1.11□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms